RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 HES2Q9Y543 173 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 DNAH12Q6ZR08 3092 aa20.33■□□□□ 0.85
COL13A1-201ENST00000354547 PEX11AO75192 247 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 TOP3BO95985 862 aaKnown RBP20.33■□□□□ 0.84
COL13A1-201ENST00000354547 GRIA1P42261 906 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 SERPINB4P48594 390 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 TTLL4Q14679 1199 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 FAM47CQ5HY64 1035 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 SULF1Q8IWU6 871 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 MIPEPQ99797 713 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 PCDH18Q9HCL0 1135 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 TRIP11Q15643 1979 aa20.33■□□□□ 0.84
COL13A1-201ENST00000354547 MCF2P10911 925 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 MYL2P10916 166 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 OSBPP22059 807 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 TAF11Q15544 211 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 MROH9Q5TGP6 573 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 TRMT10BQ6PF06 316 aaKnown RBP20.32■□□□□ 0.84
COL13A1-201ENST00000354547 TTC30AQ86WT1 665 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 INPP5DQ92835 1189 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 DHX35Q9H5Z1 703 aaKnown RBP20.32■□□□□ 0.84
COL13A1-201ENST00000354547 CYP3A43Q9HB55 503 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 PAK5Q9P286 719 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 FETUBQ9UGM5 382 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 MYO18AQ92614 2054 aaKnown RBP20.32■□□□□ 0.84
COL13A1-201ENST00000354547 PDGFRBP09619 1106 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 PTPN4P29074 926 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 RBP5P82980 135 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 GBE1Q04446 702 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 CAND1Q86VP6 1230 aaKnown RBP20.32■□□□□ 0.84
COL13A1-201ENST00000354547 MPP5Q8N3R9 675 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 SMYD2Q9NRG4 433 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 ETNK2Q9NVF9 386 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 LGALS2P05162 132 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 TNFAIP2Q03169 654 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 ACAP1Q15027 740 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 LCLAT1Q6UWP7 414 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 SLC26A11Q86WA9 606 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 AFG1LQ8WV93 481 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 APOL6Q9BWW8 343 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 RNPEPL1Q9HAU8 725 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 TTLL3Q9Y4R7 772 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 PPME1Q9Y570 386 aa20.32■□□□□ 0.84
COL13A1-201ENST00000354547 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-201ENST00000354547 NEK3P51956 506 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 CTC1Q2NKJ3 1217 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 BSPRYQ5W0U4 402 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 ALYREFQ86V81 257 aaKnown RBP20.31■□□□□ 0.84
COL13A1-201ENST00000354547 OR6B3Q8NGW1 331 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 DCPSQ96C86 337 aaKnown RBP20.31■□□□□ 0.84
COL13A1-201ENST00000354547 KLC2Q9H0B6 622 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 ASB7Q9H672 318 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 PCMTD2Q9NV79 361 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 CHADO15335 359 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 ENDOD1O94919 500 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 METTL18O95568 372 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 ADORA2BP29275 332 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 ATICP31939 592 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 ETV4P43268 484 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 CRADDP78560 199 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 APBB1IPQ7Z5R6 666 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-201ENST00000354547 KCNK13Q9HB14 408 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 GBA2Q9HCG7 927 aaPredicted RBP20.31■□□□□ 0.84
COL13A1-201ENST00000354547 MFHAS1Q9Y4C4 1052 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 PPP2R3BQ9Y5P8 575 aa20.31■□□□□ 0.84
COL13A1-201ENST00000354547 SYNJ2BP-COX16A0A087WUM0 186 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 LCP1P13796 627 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 TMPRSS15P98073 1019 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 KIZQ2M2Z5 673 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 TTC39BQ5VTQ0 682 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-201ENST00000354547 RPAINQ86UA6 219 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 UNC5BQ8IZJ1 945 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 CADM1Q9BY67 442 aaKnown RBP20.3■□□□□ 0.84
COL13A1-201ENST00000354547 SLC5A4Q9NY91 659 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 COX16Q9P0S2 106 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 A0A0G2JLL6 359 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-201ENST00000354547 SLC25A27O95847 323 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 CYP2C8P10632 490 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 CALB2P22676 271 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 BOLA3Q53S33 107 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 CASC4Q6P4E1 433 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 DSTYKQ6XUX3 929 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 PRRT2Q7Z6L0 340 aaPredicted RBP20.3■□□□□ 0.84
COL13A1-201ENST00000354547 CEP41Q9BYV8 373 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 DPEP3Q9H4B8 488 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 SLC17A6Q9P2U8 582 aa20.3■□□□□ 0.84
COL13A1-201ENST00000354547 GYG2O15488 501 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 PAPSS1O43252 624 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 KRT37O76014 449 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 UPP2O95045 317 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 CSH1P0DML2 217 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 CSH2P0DML3 217 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 CYP2F1P24903 491 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 PRKD1Q15139 912 aaPredicted RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 OLFML1Q6UWY5 402 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 ZCCHC23Q6ZST2 131 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 BZW1Q7L1Q6 419 aaKnown RBP20.29■□□□□ 0.84
COL13A1-201ENST00000354547 ARMCX2Q7L311 632 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 STK32AQ8WU08 396 aa20.29■□□□□ 0.84
COL13A1-201ENST00000354547 C18orf25Q96B23 403 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms