RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 EIF4A1P60842 406 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CDK17Q00537 523 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CYP24A1Q07973 514 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 IL18R1Q13478 541 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 OR2W6PQ8NHA6 318 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 RRN3Q9NYV6 651 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 TRMT6Q9UJA5 497 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 PLB1Q6P1J6 1458 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 KPNA3O00505 521 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 PDIA3P30101 505 aaKnown RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 KCNH2Q12809 1159 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 UBE2SQ16763 222 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 AGAP9Q5VTM2 703 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 PRR23CQ6ZRP0 262 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 ARHGEF19Q8IW93 802 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 KLF6Q99612 283 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 NMRK2Q9NPI5 230 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 PDHBP11177 359 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 SCTRP47872 440 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 CAV3P56539 151 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 XRCC4Q13426 336 aa8.27□□□□□ -1.09
SCN8A-201ENST00000354534 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.27□□□□□ -1.09
SCN8A-201ENST00000354534 SUPT7LO94864 414 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 HMBSP08397 361 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 OR8H1Q8NGG4 311 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 COA7Q96BR5 231 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 FAM217BQ9NTX9 383 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 ARHGEF6Q15052 776 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 NLRP10Q86W26 655 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 ARID3BQ8IVW6 561 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 TOR3AQ9H497 397 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PCDH12Q9NPG4 1184 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 L1RE1Q9UN81 338 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 TRIM38O00635 465 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 TBX3O15119 743 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 RLN1P04808 185 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 HOXA13P31271 388 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 RFC5P40937 340 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 IL2P60568 153 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SPIRE1Q08AE8 756 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PTK6Q13882 451 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 FAM220AQ7Z4H9 259 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 CAMK1DQ8IU85 385 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 CCDC54Q8NEL0 328 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SGF29Q96ES7 293 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SLC12A4Q9UP95 1085 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 GRIP1Q9Y3R0 1128 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SYNMO15061 1565 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 FGAP02671 866 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 GALNT3Q14435 633 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 MAPK6Q16659 721 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 ALKBH2Q6NS38 261 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 GALNT6Q8NCL4 622 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 FNIP1Q8TF40 1166 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 HPF1Q9NWY4 346 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 CRNNQ9UBG3 495 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 NUDT5Q9UKK9 219 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PFASO15067 1338 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 GDF11O95390 407 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 BTDP43251 543 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 MAZP56270 477 aaKnown RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PLD1Q13393 1074 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SLC29A2Q14542 456 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 DRAP1Q14919 205 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 RNASE12Q5GAN4 147 aaKnown RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 AADACL4Q5VUY2 407 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 GRIP2Q9C0E4 1043 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SLC52A2Q9HAB3 445 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 USP19O94966 1318 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 WRBO00258 174 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 ATP1A3P13637 1013 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PTH1RQ03431 593 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 VEPH1Q14D04 833 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 FAM83BQ5T0W9 1011 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 FAM171BQ6P995 826 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 AFTPHQ6ULP2 937 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 RCOR2Q8IZ40 523 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PARP8Q8N3A8 854 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 USP38Q8NB14 1042 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 IPMKQ8NFU5 416 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 ZNF350Q9GZX5 532 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 TOPORSQ9NS56 1045 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 GPRC5DQ9NZD1 345 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 ZNF180Q9UJW8 692 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PHTF1Q9UMS5 762 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 RRN3P2A6NIE6 340 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PBLDP30039 288 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 CCNG1P51959 295 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 METTL8Q9H825 291 aaKnown RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 STOX2Q9P2F5 926 aaPredicted RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 KCNH1O95259 989 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 SEC24AO95486 1093 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 IFNGR2P38484 337 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 STXBP1P61764 594 aaKnown RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 BNC1Q01954 994 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 BIKQ13323 160 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 DHX40Q8IX18 779 aaKnown RBP8.26□□□□□ -1.09
SCN8A-201ENST00000354534 PHF2O75151 1096 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 HOXC9P31274 260 aa8.26□□□□□ -1.09
SCN8A-201ENST00000354534 TUBA3EQ6PEY2 450 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms