RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 HS2ST1Q7LGA3 356 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 GABRG3Q99928 467 aa16.85■□□□□ 0.29
DDX55-202ENST00000354291 CHORDC1Q9UHD1 332 aaPredicted RBP16.85■□□□□ 0.29
DDX55-202ENST00000354291 EIF2B4Q9UI10 523 aaKnown RBP16.85■□□□□ 0.29
DDX55-202ENST00000354291 R3HCC1Q9Y3T6 440 aaKnown RBP16.85■□□□□ 0.29
DDX55-202ENST00000354291 PRRT4C9JH25 899 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 RRP8O43159 456 aaKnown RBP16.84■□□□□ 0.29
DDX55-202ENST00000354291 COCHO43405 550 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 IRF1P10914 325 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 ADSSP30520 456 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 CSNK1EP49674 416 aaKnown RBP16.84■□□□□ 0.29
DDX55-202ENST00000354291 ZNF131P52739 623 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 NOP14P78316 857 aaKnown RBP16.84■□□□□ 0.29
DDX55-202ENST00000354291 CFHR1Q03591 330 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 MYO1EQ12965 1108 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 POSTNQ15063 836 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 ZSWIM2Q8NEG5 633 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 CADM4Q8NFZ8 388 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 PCED1BQ96HM7 432 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 FIZ1Q96SL8 496 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 ITGA11Q9UKX5 1188 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 AK5Q9Y6K8 562 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 ATMQ13315 3056 aa16.84■□□□□ 0.29
DDX55-202ENST00000354291 METTL12A8MUP2 240 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 E9PAM4 449 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 NEDD8-MDP1E9PL57 170 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 KCNK3O14649 394 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 TLX3O43711 291 aaPredicted RBP16.83■□□□□ 0.28
DDX55-202ENST00000354291 TBCAO75347 108 aaKnown RBP16.83■□□□□ 0.28
DDX55-202ENST00000354291 JUPP14923 745 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 ABCD1P33897 745 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 SF3A1Q15459 793 aaKnown RBP16.83■□□□□ 0.28
DDX55-202ENST00000354291 MDH1BQ5I0G3 518 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 RASSF8Q8NHQ8 419 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 NOC3LQ8WTT2 800 aaKnown RBP16.83■□□□□ 0.28
DDX55-202ENST00000354291 KBTBD7Q8WVZ9 684 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 WBP2Q969T9 261 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 SAAL1Q96ER3 474 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 ZFRQ96KR1 1074 aaKnown RBP16.83■□□□□ 0.28
DDX55-202ENST00000354291 C8orf48Q96LL4 319 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 XPO6Q96QU8 1125 aaKnown RBP16.83■□□□□ 0.28
DDX55-202ENST00000354291 ITM2CQ9NQX7 267 aa16.83■□□□□ 0.28
DDX55-202ENST00000354291 VPS37CA5D8V6 355 aaPredicted RBP16.82■□□□□ 0.28
DDX55-202ENST00000354291 KCNJ18B7U540 433 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 YWHAQP27348 245 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 MCM6Q14566 821 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 PTPRNQ16849 979 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 KIF19Q2TAC6 998 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 HECTD3Q5T447 861 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 TPGS1Q6ZTW0 290 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 GPR155Q7Z3F1 870 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 TMPRSS12Q86WS5 348 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 ENGASEQ8NFI3 743 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 CXorf38Q8TB03 319 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 MYCBPAPQ8TBZ2 947 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 SNX19Q92543 992 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 FBXO32Q969P5 355 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 NXPE2Q96DL1 559 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 MMS19Q96T76 1030 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 BBS2Q9BXC9 721 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 RBAKQ9NYW8 714 aaPredicted RBP16.82■□□□□ 0.28
DDX55-202ENST00000354291 GMIPQ9P107 970 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 SIX4Q9UIU6 781 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 SNX11Q9Y5W9 270 aa16.82■□□□□ 0.28
DDX55-202ENST00000354291 TYRP14679 529 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 OXTRP30559 389 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 GRK6P43250 576 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 CACNA2D1P54289 1103 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 CLDN6P56747 220 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 STARD3Q14849 445 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 FUT11Q495W5 492 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 C6orf118Q5T5N4 469 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 METTL3Q86U44 580 aaKnown RBP16.81■□□□□ 0.28
DDX55-202ENST00000354291 BRSK2Q8IWQ3 736 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 HPDLQ96IR7 371 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 MTMR12Q9C0I1 747 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 NACA2Q9H009 215 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 CCSER2Q9H7U1 834 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 USP36Q9P275 1121 aaKnown RBP16.81■□□□□ 0.28
DDX55-202ENST00000354291 STON1Q9Y6Q2 735 aa16.81■□□□□ 0.28
DDX55-202ENST00000354291 GOLGA8IPA6NC78 632 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 GOLGA8JA6NMD2 632 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 PYCARD-AS1I3L0S3 204 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 GFRA2O00451 464 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 TMEM191BP0C7N4 346 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 DDIT3P35638 169 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 GNL1P36915 607 aaPredicted RBP16.8■□□□□ 0.28
DDX55-202ENST00000354291 TPMTP51580 245 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 NUP93Q8N1F7 819 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 RAD54LQ92698 747 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 BHMTQ93088 406 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 SIPA1Q96FS4 1042 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 ARID3AQ99856 593 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 NUP58Q9BVL2 599 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 TRIM9Q9C026 710 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 MKRN2Q9H000 416 aaKnown RBP16.8■□□□□ 0.28
DDX55-202ENST00000354291 SNX25Q9H3E2 840 aa16.8■□□□□ 0.28
DDX55-202ENST00000354291 PDE11AQ9HCR9 933 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms