RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ATP5OP48047 213 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 SCNN1DP51172 638 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 PKNOX1P55347 436 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 EIF3EP60228 445 aaKnown RBP7.91□□□□□ -1.14
BRCA1-201ENST00000352993 ESRRGP62508 458 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 GTF2IP78347 998 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 PRAMEP78395 509 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 GPSM2P81274 684 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 SHROOM1Q2M3G4 852 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-201ENST00000352993 FBXW8Q8N3Y1 598 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 MZB1Q8WU39 189 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 NLRP7Q8WX94 980 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 MBOAT7Q96N66 472 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 FAM213AQ9BRX8 229 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 WDR18Q9BV38 432 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 TEKT3Q9BXF9 490 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 C20orf27Q9GZN8 174 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 SENP6Q9GZR1 1112 aaPredicted RBP7.91□□□□□ -1.14
BRCA1-201ENST00000352993 C1orf21Q9H246 121 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 UNC45AQ9H3U1 944 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 MAN1C1Q9NR34 630 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 ZC3H7BQ9UGR2 993 aaKnown RBP7.91□□□□□ -1.14
BRCA1-201ENST00000352993 PSMD13Q9UNM6 376 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 DRG1Q9Y295 367 aaKnown RBP7.91□□□□□ -1.14
BRCA1-201ENST00000352993 SNCAIPQ9Y6H5 919 aa7.91□□□□□ -1.14
BRCA1-201ENST00000352993 A0A1B0GTW7 788 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 CCNT2O60583 730 aaKnown RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 UGT1A9O60656 530 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 KRT38O76015 456 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 ENO3P13929 434 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 CDH2P19022 906 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 OXCT1P55809 520 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 RHBDL3P58872 404 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 PTP4A2Q12974 167 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 PDAP1Q13442 181 aaKnown RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 SNAPC2Q13487 334 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 POTEHQ6S545 545 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 PACS1Q6VY07 963 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 CROCCP3Q8IVE0 287 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 UNC45BQ8IWX7 931 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 PIWIL2Q8TC59 973 aaKnown RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 SERPINI1Q99574 410 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 SEMA6AQ9H2E6 1030 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 ARMC7Q9H6L4 198 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 UGT1A7Q9HAW7 530 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 UGT1A10Q9HAW8 530 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 UGT1A8Q9HAW9 530 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 CD209Q9NNX6 404 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 PNPOQ9NVS9 261 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 THAP1Q9NVV9 213 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 hCG_1818297A0A087WSY0 165 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 SDR42E2A6NKP2 422 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 WDR64B1ANS9 1081 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 BTBD19C9JJ37 291 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 GIPC1O14908 333 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 RIMBP2O15034 1052 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 MCF2LO15068 1137 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 ITM2AO43736 263 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 ITGAVP06756 1048 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 PORP16435 677 aaPredicted RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 ADRA2BP18089 450 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 ITGAXP20702 1163 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 SLC5A3P53794 718 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 SLC18A2Q05940 514 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 AOC3Q16853 763 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 FRMD7Q6ZUT3 714 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 FASTKD5Q7L8L6 764 aaKnown RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 NANOGNBQ7Z5D8 188 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 DAW1Q8N136 415 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 HSPH1Q92598 858 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 WRNIP1Q96S55 665 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 CORO1BQ9BR76 489 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 RAB6BQ9NRW1 208 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 EXOC7Q9UPT5 735 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 MYH14Q7Z406 1995 aaKnown RBP7.9□□□□□ -1.14
BRCA1-201ENST00000352993 MYPNQ86TC9 1320 aa7.9□□□□□ -1.14
BRCA1-201ENST00000352993 TMEM247A6NEH6 219 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 CXorf49A8MYA2 514 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 NEMP1O14524 444 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 CBFA2T3O75081 653 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 SEC24DO94855 1032 aaPredicted RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 P4HBP07237 508 aaKnown RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 ARP10275 920 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 ZNF24P17028 368 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 AOC1P19801 751 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 FGFR3P22607 806 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 HOXD12P35452 270 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 SLC1A6P48664 564 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 EIF2B2P49770 351 aaKnown RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 WASHC5Q12768 1159 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 MYBPC2Q14324 1141 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 ANKDD1AQ495B1 522 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 FAM91A1Q658Y4 838 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 TMEM53Q6P2H8 277 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 CASC4Q6P4E1 433 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 MON1BQ7L1V2 547 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 ERI1Q8IV48 349 aaKnown RBP7.9□□□□□ -1.15
BRCA1-201ENST00000352993 AHI1Q8N157 1196 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 RIN3Q8TB24 985 aa7.9□□□□□ -1.15
BRCA1-201ENST00000352993 CDRT15Q96T59 188 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms