RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 CEP95Q96GE4 821 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 KCNK16Q96T55 309 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 FERMT1Q9BQL6 677 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 CDH7Q9ULB5 785 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 ERGIC3Q9Y282 383 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
IFT88-202ENST00000351808 CFAP99D6REC4 459 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 CALCAP01258 141 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 GNA12Q03113 381 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 WASHC5Q12768 1159 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 E2F2Q14209 437 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 IL23RQ5VWK5 629 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 KRT80Q6KB66 452 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 SETD3Q86TU7 594 aaPredicted RBP13.71□□□□□ -0.21
IFT88-202ENST00000351808 ZCRB1Q8TBF4 217 aaKnown RBP13.71□□□□□ -0.21
IFT88-202ENST00000351808 EFHD2Q96C19 240 aaPredicted RBP13.71□□□□□ -0.21
IFT88-202ENST00000351808 RMND5BQ96G75 393 aaPredicted RBP13.71□□□□□ -0.21
IFT88-202ENST00000351808 CDH19Q9H159 772 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 APOBEC2Q9Y235 224 aaKnown RBP13.71□□□□□ -0.21
IFT88-202ENST00000351808 PRELID1Q9Y255 219 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 LAMB2P55268 1798 aa13.71□□□□□ -0.21
IFT88-202ENST00000351808 NOTOA8MTQ0 251 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 FAM155BO75949 473 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 INHBAP08476 426 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 PTPN1P18031 435 aaKnown RBP13.71□□□□□ -0.22
IFT88-202ENST00000351808 NR4A1P22736 598 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 IREB2P48200 963 aaKnown RBP13.71□□□□□ -0.22
IFT88-202ENST00000351808 ZBED5Q49AG3 693 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 TRIM72Q6ZMU5 477 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 LYSMD3Q7Z3D4 306 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 DNAJC10Q8IXB1 793 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 CADM3Q8N126 398 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 TANKQ92844 425 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 WNK4Q96J92 1243 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 CCDC138Q96M89 665 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 RPF2Q9H7B2 306 aaKnown RBP13.71□□□□□ -0.22
IFT88-202ENST00000351808 SHOC2Q9UQ13 582 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 USTQ9Y2C2 406 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 TTLL3Q9Y4R7 772 aa13.71□□□□□ -0.22
IFT88-202ENST00000351808 MGEA5O60502 916 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 KLHL41O60662 606 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 RFX1P22670 979 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 GCLMP48507 274 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 OTUD4Q01804 1114 aaKnown RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 BFSP1Q12934 665 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 MOGQ16653 247 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 ATP13A4Q4VNC1 1196 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 ZFYVE27Q5T4F4 411 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 C12orf60Q5U649 245 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 TMEM79Q9BSE2 394 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 CCDC68Q9H2F9 335 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 SIRPGQ9P1W8 387 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 ZBTB21Q9ULJ3 1066 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 ERVK-11Q9UQG0 969 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 PLLPQ9Y342 182 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 NFASCO94856 1347 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 FRMPD2Q68DX3 1309 aaPredicted RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 TRIM64CA6NLI5 447 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 TRIM49D1C9J1S8 452 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 H3BMQ9 156 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 TNFRSF10AO00220 468 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 LYPLA1O75608 230 aaPredicted RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 NCF2P19878 526 aaPredicted RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 JAK1P23458 1154 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 STX3Q13277 289 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 TIGD2Q4W5G0 525 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 AARS2Q5JTZ9 985 aaKnown RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 MYCT1Q8N699 235 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 KBTBD7Q8WVZ9 684 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 CEP295NLQ96MC4 621 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 COG8Q96MW5 612 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 GPR101Q96P66 508 aaPredicted RBP13.7□□□□□ -0.22
IFT88-202ENST00000351808 TMEM121Q9BTD3 319 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 N6AMT1Q9Y5N5 214 aa13.7□□□□□ -0.22
IFT88-202ENST00000351808 USP17L5A8MUK1 530 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 SGK1O00141 431 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 PLOD2O00469 737 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ATP5BP06576 529 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 ATF7P17544 494 aaPredicted RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 PTPN2P17706 415 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 TUBA4AP68366 448 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 MRPS9P82933 396 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 FLOT2Q14254 428 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 NDUFA5Q16718 116 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 GPR107Q5VW38 600 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 ACAD10Q6JQN1 1059 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 POTEAQ6S8J7 498 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 FAM71AQ8IYT1 594 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 PHTF2Q8N3S3 785 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 MAELQ96JY0 434 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 ORAI2Q96SN7 254 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 HERC2P3Q9BVR0 1158 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 UNKQ9C0B0 810 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 XAB2Q9HCS7 855 aaKnown RBP13.69□□□□□ -0.22
IFT88-202ENST00000351808 RABL2BQ9UNT1 228 aa13.69□□□□□ -0.22
IFT88-202ENST00000351808 NOP56O00567 594 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms