RNA–Protein interactions for RNA: ENST00000348165.9

UBE3C-201, Transcript of ubiquitin protein ligase E3C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3C, Length 5,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-201ENST00000348165 ELAVL2Q12926 359 aaKnown RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 ACBD5Q5T8D3 534 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 NT5DC1Q5TFE4 455 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 AGAP9Q5VTM2 703 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 RIC8BQ9NVN3 520 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 SMPD4Q9NXE4 827 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 CYP3A4P08684 503 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 EPHB3P54753 998 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 RHOAP61586 193 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 CBWD6Q4V339 395 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 CBWD3Q5JTY5 395 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 CBWD5Q5RIA9 395 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 C11orf96Q7Z7L8 435 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 AGGF1Q8N302 714 aaeCLIP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 USP13Q92995 863 aaPredicted RBP19.21■□□□□ 0.67
UBE3C-201ENST00000348165 TMEM161AQ9NX61 479 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 WHRNQ9P202 907 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 DEPDC5O75140 1603 aa19.21■□□□□ 0.67
UBE3C-201ENST00000348165 SCNN1BP51168 640 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 PSMD7P51665 324 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 EVX2Q03828 476 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 TFAP2DQ7Z6R9 452 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 MAP4K3Q8IVH8 894 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 RBM22Q9NW64 420 aaKnown RBP eCLIP19.2■□□□□ 0.668e-8■■■■■ 41.3
UBE3C-201ENST00000348165 GPRC5DQ9NZD1 345 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 MYL4P12829 197 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 YWHAZP63104 245 aaKnown RBP19.2■□□□□ 0.66
UBE3C-201ENST00000348165 BTKQ06187 659 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 CATSPERGQ6ZRH7 1159 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 CCNJLQ8IV13 435 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 LRRC34Q8IZ02 419 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 SLC2A14Q8TDB8 520 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 SPTLC1O15269 473 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 CAND2O75155 1236 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 CNGA3Q16281 694 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 PTGISQ16647 500 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 SPASTQ9UBP0 616 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 DDX3XO00571 662 aaKnown RBP eCLIP19.2■□□□□ 0.661e-28■■■■■ 26.8
UBE3C-201ENST00000348165 OR9Q1Q8NGQ5 310 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 ILKAPQ9H0C8 392 aaPredicted RBP19.2■□□□□ 0.66
UBE3C-201ENST00000348165 KANSL3Q9P2N6 904 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 SLC25A13Q9UJS0 675 aa19.2■□□□□ 0.66
UBE3C-201ENST00000348165 MEIS2O14770 477 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 FAM107AO95990 144 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 CCDC15Q0P6D6 951 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 TEX9Q8N6V9 391 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 COLGALT1Q8NBJ5 622 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 NAT9Q9BTE0 207 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 SCUBE2Q9NQ36 999 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 CYP39A1Q9NYL5 469 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 PNMA8BQ9ULN7 279 aaPredicted RBP19.19■□□□□ 0.66
UBE3C-201ENST00000348165 RUVBL2Q9Y230 463 aaKnown RBP19.19■□□□□ 0.66
UBE3C-201ENST00000348165 PCDHB5Q9Y5E4 795 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 MYO1GB0I1T2 1018 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 GJB6O95452 261 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 GLI1P08151 1106 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 CCR1P32246 355 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 KCNK10P57789 538 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 PLIN5Q00G26 463 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 WDR93Q6P2C0 686 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 USP50Q70EL3 339 aaPredicted RBP19.19■□□□□ 0.66
UBE3C-201ENST00000348165 ZSWIM2Q8NEG5 633 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 UCMAQ8WVF2 138 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 EME1Q96AY2 570 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 GAD1Q99259 594 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 CYP4F12Q9HCS2 524 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 TMEM51Q9NW97 253 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 V9GYQ6 96 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 EPB42P16452 691 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 C1orf186Q6ZWK4 172 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 ILDR2Q71H61 639 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 DPF3Q92784 378 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 ADNPQ9H2P0 1102 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 RAB27AP51159 221 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 CASP5P51878 434 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 ERMARDQ5T6L9 678 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 IQSEC1Q6DN90 963 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 UNC45BQ8IWX7 931 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 HAS1Q92839 578 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 PAFAH2Q99487 392 aa19.19■□□□□ 0.66
UBE3C-201ENST00000348165 GLRA3O75311 464 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 VPS26AO75436 327 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 MICAL2O94851 1124 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 KCNA4P22459 653 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 PRAMEF19Q5SWL8 479 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 MOB2Q70IA6 237 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 STRA8Q7Z7C7 330 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 CLEC4FQ8N1N0 589 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 SOCS4Q8WXH5 440 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 DISP2A7MBM2 1401 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 BTG3Q14201 252 aaPredicted RBP19.18■□□□□ 0.66
UBE3C-201ENST00000348165 UGT3A1Q6NUS8 523 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 C16orf89Q6UX73 402 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 CXCL17Q6UXB2 119 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 C15orf52Q6ZUT6 534 aaKnown RBP19.18■□□□□ 0.66
UBE3C-201ENST00000348165 KAT5Q92993 513 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 TUBGCP3Q96CW5 907 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 FUT8Q9BYC5 575 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 UBXN6Q9BZV1 441 aa19.18■□□□□ 0.66
UBE3C-201ENST00000348165 TRIM17Q9Y577 477 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms