RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 CNGB3Q9NQW8 809 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 RASAL2Q9UJF2 1139 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 ZNF510Q9Y2H8 683 aa16.56■□□□□ 0.24
TSPAN4-201ENST00000346501 HELZP42694 1942 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 SHISA7A6NL88 538 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 SART1O43290 800 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 THAP12O43422 761 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 FBXO21O94952 628 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 LETM1O95202 739 aaPredicted RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 TBX18O95935 607 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 ADH5P11766 374 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 LCP1P13796 627 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 PTMSP20962 102 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 PON1P27169 355 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 GNA15P30679 374 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 NBL1P41271 181 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 ACADSBP45954 432 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 MRE11P49959 708 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 GALK1P51570 392 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 SNX16P57768 344 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 ZXDBP98169 803 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 PTK2Q05397 1052 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 FZD5Q13467 585 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 CCINQ13939 588 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 DHCR24Q15392 516 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 TCP11X2Q5H9J9 407 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 PM20D1Q6GTS8 502 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 HTR3DQ70Z44 454 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 ALYREFQ86V81 257 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 MIB1Q86YT6 1006 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 TFAP2BQ92481 460 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 HSFY1Q96LI6 401 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 KREMEN1Q96MU8 473 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 TRIM62Q9BVG3 475 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 KLF16Q9BXK1 252 aaPredicted RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 NMUR1Q9HB89 426 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 RBM12Q9NTZ6 932 aaKnown RBP16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 CNTN6Q9UQ52 1028 aa16.55■□□□□ 0.24
TSPAN4-201ENST00000346501 MYO16Q9Y6X6 1858 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 COL4A2P08572 1712 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 OTOL1A6NHN0 477 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 RNF225M0QZC1 329 aaPredicted RBP16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 CYP17A1P05093 508 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 CDK11BP21127 795 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 EIF2DP41214 584 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 BPIFB4P59827 614 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 MYL5Q02045 173 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 EFEMP1Q12805 493 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 MEA1Q16626 185 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 ANO4Q32M45 955 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 SCD5Q86SK9 330 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 ZNF687Q8N1G0 1237 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 SCML4Q8N228 414 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 IRGQQ8WZA9 623 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 SECISBP2LQ93073 1101 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 ACDQ96AP0 544 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 ZFRQ96KR1 1074 aaKnown RBP16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 NOX5Q96PH1 765 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 ST7Q9NRC1 585 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 ABCC13Q9NSE7 274 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 MARCH2Q9P0N8 246 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 NUDT5Q9UKK9 219 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 CEP83Q9Y592 693 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 PCDHGA2Q9Y5H1 932 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 PATJQ8NI35 1801 aa16.54■□□□□ 0.24
TSPAN4-201ENST00000346501 KIF26AQ9ULI4 1882 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 PROB1E7EW31 1015 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 SCAMP3O14828 347 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 APODP05090 189 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 CHKAP35790 457 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 RGS7P49802 495 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 ZNF132P52740 706 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 LY6G5CQ5SRR4 150 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 FSTL4Q6MZW2 842 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 BBS7Q8IWZ6 715 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 SLC35F5Q8WV83 523 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 CHFRQ96EP1 664 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 XPO6Q96QU8 1125 aaKnown RBP16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 PNKPQ96T60 521 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 PDCL3Q9H2J4 239 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 PRMT8Q9NR22 394 aaPredicted RBP16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 SPHK2Q9NRA0 654 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 OSER1Q9NX31 292 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 ZSCAN32Q9NX65 697 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 WDR35Q9P2L0 1181 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 DNAJC12Q9UKB3 198 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 SLC8A2Q9UPR5 921 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 COL4A3Q01955 1670 aa16.53■□□□□ 0.24
TSPAN4-201ENST00000346501 SLC12A8A0AV02 714 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 TULP2O00295 520 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 KRT9P35527 623 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 HARS2P49590 506 aaKnown RBP16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 PGFP49763 221 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 RAPGEF1Q13905 1077 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 PKDCCQ504Y2 493 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 BSPRYQ5W0U4 402 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 GJB7Q6PEY0 223 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 RHBDF2Q6PJF5 856 aa16.52■□□□□ 0.24
TSPAN4-201ENST00000346501 STK32AQ8WU08 396 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms