RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 DNALI1O14645 258 aaPredicted RBP13.82□□□□□ -0.2
CASC4-202ENST00000345795 CBX6O95503 412 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 IRF1P10914 325 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 EZRP15311 586 aaKnown RBP13.82□□□□□ -0.2
CASC4-202ENST00000345795 ICAM3P32942 547 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 CLCNKBP51801 687 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 GJA9P57773 515 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 TTC30AQ86WT1 665 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 TCP10LQ8TDR4 215 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 ZNF669Q96BR6 464 aaPredicted RBP13.82□□□□□ -0.2
CASC4-202ENST00000345795 ZNF518BQ9C0D4 1074 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 AVENQ9NQS1 362 aaPredicted RBP13.82□□□□□ -0.2
CASC4-202ENST00000345795 FAM53CQ9NYF3 392 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 L3MBTL1Q9Y468 752 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 GRIN2DO15399 1336 aa13.82□□□□□ -0.2
CASC4-202ENST00000345795 EVPLQ92817 2033 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 LAMB1P07942 1786 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 CILPO75339 1184 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 BGNP21810 368 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ALDH18A1P54886 795 aaKnown RBP13.81□□□□□ -0.2
CASC4-202ENST00000345795 SNX17Q15036 470 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 MGAT5BQ3V5L5 792 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 DUSP28Q4G0W2 176 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 MSS51Q4VC12 460 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 LRRC6Q86X45 466 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 PHF13Q86YI8 300 aaPredicted RBP13.81□□□□□ -0.2
CASC4-202ENST00000345795 PPIL6Q8IXY8 311 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 SENP8Q96LD8 212 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 LRRC19Q9H756 370 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 TRMT13Q9NUP7 481 aaKnown RBP13.81□□□□□ -0.2
CASC4-202ENST00000345795 ETNK2Q9NVF9 386 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ZFATQ9P243 1243 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 SFMBT1Q9UHJ3 866 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 PACSIN3Q9UKS6 424 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 MYBPHLA2RUH7 354 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ADCY6O43306 1168 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 THP07101 528 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 CORO7P57737 925 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 MAP3K10Q02779 954 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 TARBP2Q15633 366 aaKnown RBP13.81□□□□□ -0.2
CASC4-202ENST00000345795 LRRC36Q1X8D7 754 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ERMARDQ5T6L9 678 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 KATNAL2Q8IYT4 538 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 TTC13Q8NBP0 860 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 OR6P1Q8NGX9 317 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ART4Q93070 314 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ZNF560Q96MR9 790 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 XYLT2Q9H1B5 865 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 FZD8Q9H461 694 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 PLEKHA5Q9HAU0 1116 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 VTA1Q9NP79 307 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.81□□□□□ -0.28e-6■■■□□ 18.7
CASC4-202ENST00000345795 IPPQ9Y573 584 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 SIGLEC16A6NMB1 481 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 TRDMT1O14717 391 aaKnown RBP13.81□□□□□ -0.2
CASC4-202ENST00000345795 TYK2P29597 1187 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 CDKN2BP42772 138 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 HFE2Q6ZVN8 426 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 POLNQ7Z5Q5 900 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 ARID3BQ8IVW6 561 aaPredicted RBP13.81□□□□□ -0.2
CASC4-202ENST00000345795 PTPN18Q99952 460 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 FAM167BQ9BTA0 163 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 SLC17A7Q9P2U7 560 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.81□□□□□ -0.2
CASC4-202ENST00000345795 SLC27A5Q9Y2P5 690 aa13.81□□□□□ -0.2
CASC4-202ENST00000345795 CFLARO15519 480 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 PAPSS1O43252 624 aaPredicted RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 TMEM63AO94886 807 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 SLC26A2P50443 739 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 RTP1P59025 263 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 TRPM8Q7Z2W7 1104 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 ST13P5Q8NFI4 369 aaPredicted RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 PPTC7Q8NI37 304 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 PPP4R1Q8TF05 950 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 LRRC37BQ96QE4 947 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 WHRNQ9P202 907 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 STAP1Q9ULZ2 295 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 RPS6KL1Q9Y6S9 549 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 POLR2AP24928 1970 aaKnown RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 IGF2BP3O00425 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
CASC4-202ENST00000345795 TRAPPC3O43617 180 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 DIAPH2O60879 1101 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 PIRTP0C851 137 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 ERVK-10P10266 1014 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 KCNA4P22459 653 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 EPHB1P54762 984 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 DPYSL3Q14195 570 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 STAT4Q14765 748 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 SOWAHAQ2M3V2 549 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 HABP4Q5JVS0 413 aaKnown RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 AGBL2Q5U5Z8 902 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 BTBD8Q5XKL5 378 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 CCDC62Q6P9F0 684 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 FAM129AQ9BZQ8 928 aa13.8□□□□□ -0.2
CASC4-202ENST00000345795 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 ZNF395Q9H8N7 513 aaPredicted RBP13.8□□□□□ -0.2
CASC4-202ENST00000345795 XPNPEP3Q9NQH7 507 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms