RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 MTTPP55157 894 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 SV2CQ496J9 727 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 PDPK2PQ6A1A2 396 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 KBTBD8Q8NFY9 601 aa19.94■□□□□ 0.78
HDAC4-201ENST00000345617 RAP1GAPP47736 663 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 CPA2P48052 419 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 RRN3Q9NYV6 651 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 MROH7-TTC4A0A0A0MT08 1334 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 PAICSP22234 425 aaKnown RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 OR2W6PQ8NHA6 318 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 OXNAD1Q96HP4 312 aaPredicted RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 APOL5Q9BWW9 433 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 GPR63Q9BZJ6 419 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 NIF3L1Q9GZT8 377 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 UBDO15205 165 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 PECAM1P16284 738 aaPredicted RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 CASP1P29466 404 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 GRAPQ13588 217 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 EPB41L4BQ9H329 900 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 KLHL28Q9NXS3 571 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 CLTBP09497 229 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 TPBGLP0DKB5 382 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 PSMB9P28065 219 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 BICRALQ6AI39 1079 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 KYAT3Q6YP21 454 aaKnown RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 CENPTQ96BT3 561 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 PPP1R10Q96QC0 940 aaKnown RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 PNKPQ96T60 521 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 UBOX5O94941 541 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 S100A6P06703 90 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 VCLP18206 1134 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 FRG1Q14331 258 aaKnown RBP19.93■□□□□ 0.78
HDAC4-201ENST00000345617 XRRA1Q6P2D8 792 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 TMEM237Q96Q45 408 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 NUAK2Q9H093 628 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 UBP1Q9NZI7 540 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 UBE2QL1A1L167 161 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 FAM20BO75063 409 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 CORO2BQ9UQ03 480 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 MGAT4DA6NG13 374 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 H3BNX3 289 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 FIGNQ5HY92 759 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 TBCELQ5QJ74 424 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 KLHL24Q6TFL4 600 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 SQORQ9Y6N5 450 aa19.93■□□□□ 0.78
HDAC4-201ENST00000345617 NR5A2O00482 541 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 SERPIND1P05546 499 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 CLTCL1P53675 1640 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 XIAPP98170 497 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 ZNF57Q68EA5 555 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 NET1Q7Z628 596 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 TMCO1Q9UM00 188 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 CST8O60676 142 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 RAB15P59190 212 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 KCNB2Q92953 911 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 MNTQ99583 582 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 TTC30BQ8N4P2 665 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 RIN2Q8WYP3 895 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 IL12AP29459 219 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 NR1H2P55055 460 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 EPHA7Q15375 998 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 GSAPA4D1B5 854 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 GSTM1P09488 218 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 RASA1P20936 1047 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 IL5RAQ01344 420 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 NFYCQ13952 458 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 RUNDC3AQ59EK9 446 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 CENPIQ92674 756 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 PPP1R14BQ96C90 147 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 CELF4Q9BZC1 486 aaKnown RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 COMMD9Q9P000 198 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 CORO1CQ9ULV4 474 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 ATP4AP20648 1035 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 INO80DQ53TQ3 878 aaPredicted RBP19.92■□□□□ 0.78
HDAC4-201ENST00000345617 NEK5Q6P3R8 708 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 NANOGNBQ7Z5D8 188 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 PAFAH2Q99487 392 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 KCNK4Q9NYG8 393 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 CENPAP49450 140 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 FBXO42Q6P3S6 717 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 ADCK2Q7Z695 626 aa19.92■□□□□ 0.78
HDAC4-201ENST00000345617 ADCY6O43306 1168 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 ATG7O95352 703 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 GH2P01242 217 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 FXR1P51114 621 aaKnown RBP eCLIP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 VAC14Q08AM6 782 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 EPHX4Q8IUS5 362 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 OXER1Q8TDS5 423 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CDK5RAP1Q96SZ6 601 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 SNAPC5O75971 98 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 S100GP29377 79 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 PSMD4P55036 377 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CCDC88AQ3V6T2 1871 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 LRRC40Q9H9A6 602 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 NEK6Q9HC98 313 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 CYLDQ9NQC7 956 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 METTL5Q9NRN9 209 aaKnown RBP19.91■□□□□ 0.78
HDAC4-201ENST00000345617 SLC25A13Q9UJS0 675 aa19.91■□□□□ 0.78
HDAC4-201ENST00000345617 POLIQ9UNA4 740 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms