RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 TRABD2AQ86V40 505 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 DAW1Q8N136 415 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ALLCQ8N6M5 410 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 HTR3CQ8WXA8 447 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 PRCCQ92733 491 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 NCLNQ969V3 563 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CDT1Q9H211 546 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 ACSS3Q9H6R3 686 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 EML4Q9HC35 981 aaKnown RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 WARS2Q9UGM6 360 aaKnown RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 TAGLN3Q9UI15 199 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SPATA31C2B4DYI2 1134 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 KCNA2P16389 499 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 NUDT2P50583 147 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 N4BP2L1Q5TBK1 243 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 TAS2R42Q7RTR8 314 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 TMPRSS6Q8IU80 811 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CATSPER1Q8NEC5 780 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 COPS5Q92905 334 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 EGFL8Q99944 293 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 KATNAL1Q9BW62 490 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 YY1AP1Q9H869 796 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 SPON1Q9HCB6 807 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 PRG3Q9Y2Y8 225 aaPredicted RBP7.43□□□□□ -1.22
VCAN-202ENST00000342785 ACOT9Q9Y305 439 aa7.43□□□□□ -1.22
VCAN-202ENST00000342785 CXCL11O14625 94 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 SKAP2O75563 359 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 ACAT1P24752 427 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 SLC6A3Q01959 620 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 FLOT2Q14254 428 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 LINC00523Q86TU6 105 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ADGRF2Q8IZF7 708 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 DEFB106AQ8N104 65 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 GALNT4Q8N4A0 578 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 AGAP11Q8TF27 550 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ASCC2Q9H1I8 757 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 UBP1Q9NZI7 540 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 MAFO75444 373 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 ZNF286BP0CG31 522 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 IL10P22301 178 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 CNTFP26441 200 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 GP5P40197 560 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 PDCD2Q16342 344 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 PLEKHA7Q6IQ23 1121 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 C16orf89Q6UX73 402 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 POLNQ7Z5Q5 900 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 CATSPERBQ9H7T0 1116 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ABT1Q9ULW3 272 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 CDYLQ9Y232 598 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 E9PBE3 544 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 KLHL41O60662 606 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 DDNO94850 711 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 APOA4P06727 396 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 NFICP08651 508 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 TKTL1P51854 596 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 PDK4Q16654 411 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 NBPF20Q3BBV1 942 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 PAN2Q504Q3 1202 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 WASHC2DQ5SRD0 308 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 MFSD14CQ5VZR4 134 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 GLB1LQ6UWU2 654 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 OXNAD1Q96HP4 312 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 MRPL46Q9H2W6 279 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 CHST12Q9NRB3 414 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 NOCTQ9UK39 431 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 TNFSF13BQ9Y275 285 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 NFASCO94856 1347 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 BANF1O75531 89 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 KCNA4P22459 653 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 C6orf10Q5SRN2 563 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 MFSD5Q6N075 450 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ZCCHC23Q6ZST2 131 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ZNF572Q7Z3I7 529 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 URGCPQ8TCY9 931 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 SLC2A14Q8TDB8 520 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 APBB2Q92870 758 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 LRRC39Q96DD0 335 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 NRBF2Q96F24 287 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 RMDN2Q96LZ7 410 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 TSR3Q9UJK0 312 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 COL1A1P02452 1464 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 ZCCHC18P0CG32 403 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 THRAP10827 490 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ALADP13716 330 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 FAM83EQ2M2I3 478 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 TRMT5Q32P41 509 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 POU5F2Q8N7G0 328 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 BTBD10Q9BSF8 475 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 IARS2Q9NSE4 1012 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 ARHGAP28Q9P2N2 729 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 STARD13Q9Y3M8 1113 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 PPP2R3BQ9Y5P8 575 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 VIRMAQ69YN4 1812 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 B4GALT5O43286 388 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 CSPG5O95196 566 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 AKAP5P24588 427 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 ZNF143P52747 638 aaPredicted RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 DYNC1I2Q13409 638 aaKnown RBP7.42□□□□□ -1.22
VCAN-202ENST00000342785 SLC27A1Q6PCB7 646 aa7.42□□□□□ -1.22
VCAN-202ENST00000342785 JOSD2Q8TAC2 188 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms