RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 GRIN3BO60391 1043 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 BPGMP07738 259 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 INHBBP09529 407 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 ETS1P14921 441 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 CDK8P49336 464 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 DCAF6Q58WW2 860 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 FNBP1LQ5T0N5 605 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SPOPLQ6IQ16 392 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 ZNF677Q86XU0 584 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SDR16C5Q8N3Y7 309 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SLC44A5Q8NCS7 719 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 TRUB1Q8WWH5 349 aaKnown RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 CSRNP1Q96S65 589 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 CLK4Q9HAZ1 481 aaKnown RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SPO11Q9Y5K1 396 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 A0A087WXM4 84 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 MYOCOSA0A1B0GUC4 107 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SGK1O00141 431 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 KPNA4O00629 521 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 PFDN6O15212 129 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 PABPC1P11940 636 aaKnown RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 UNGP13051 313 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 PRDX5P30044 214 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 ECE1P42892 770 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 MXI1P50539 228 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 GSTO1P78417 241 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 CDKL1Q00532 357 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 PPP3CAQ08209 521 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SMUG1Q53HV7 270 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 CLVS1Q8IUQ0 354 aaPredicted RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 C12orf43Q96C57 262 aaKnown RBP19.16■□□□□ 0.66
SMPD1-201ENST00000342245 IFT122Q9HBG6 1241 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 SNX9Q9Y5X1 595 aa19.16■□□□□ 0.66
SMPD1-201ENST00000342245 TRIM64CA6NLI5 447 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 PSMD12O00232 456 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SORBS2O94875 1100 aaKnown RBP19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SNHG28P0DPA3 235 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 CCDC130P13994 396 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 AP3B2Q13367 1082 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 ITPK1Q13572 414 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 MTMR2Q13614 643 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 C16orf89Q6UX73 402 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 ISLR2Q6UXK2 745 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 C1orf186Q6ZWK4 172 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 C12orf56Q8IXR9 622 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 ADAMTS16Q8TE57 1224 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 C10orf88Q9H8K7 445 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 PNPLA8Q9NP80 782 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SLC30A1Q9Y6M5 507 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 RBBP6Q7Z6E9 1792 aaKnown RBP19.15■□□□□ 0.66
SMPD1-201ENST00000342245 FRMPD2Q68DX3 1309 aaPredicted RBP19.15■□□□□ 0.66
SMPD1-201ENST00000342245 ARHGEF37A1IGU5 675 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 GOLGA8SH3BPF8 625 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 GOLGA8MH3BSY2 632 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 BANF1O75531 89 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 CD58P19256 250 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 TKTP29401 623 aaKnown RBP19.15■□□□□ 0.66
SMPD1-201ENST00000342245 GCLMP48507 274 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 DLG4P78352 724 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 CYP4A11Q02928 519 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 TMEM214Q6NUQ4 689 aaKnown RBP19.15■□□□□ 0.66
SMPD1-201ENST00000342245 PPP1R2P3Q6NXS1 205 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 CARM1Q86X55 608 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 TBC1D15Q8TC07 691 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 KAT5Q92993 513 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 BHMTQ93088 406 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 OTUD5Q96G74 571 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SLITRK1Q96PX8 696 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 JMJD4Q9H9V9 463 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SEPT3Q9UH03 358 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SYNPO2Q9UMS6 1093 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 ERGIC3Q9Y282 383 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 PLIN4Q96Q06 1357 aa19.15■□□□□ 0.66
SMPD1-201ENST00000342245 SFI1A8K8P3 1242 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 XPO1O14980 1071 aaKnown RBP19.14■□□□□ 0.66
SMPD1-201ENST00000342245 PCYT1AP49585 367 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 TAS2R40P59535 323 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 PPP4CP60510 307 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 ARL13BQ3SXY8 428 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 KRT80Q6KB66 452 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 NANOGP8Q6NSW7 305 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 SAPCD2Q86UD0 394 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 PCYOX1LQ8NBM8 494 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 CPT1BQ92523 772 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 ZNF597Q96LX8 424 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 DOK1Q99704 481 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 MECRQ9BV79 373 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 ZNF341Q9BYN7 854 aa19.14■□□□□ 0.66
SMPD1-201ENST00000342245 AQP9O43315 295 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 NTSR2O95665 410 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 ADRA2BP18089 450 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 HOXA10P31260 410 aaPredicted RBP19.14■□□□□ 0.65
SMPD1-201ENST00000342245 YWHAGP61981 247 aaKnown RBP eCLIP19.14■□□□□ 0.65
SMPD1-201ENST00000342245 ALCAMQ13740 583 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 FLOT2Q14254 428 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 PDK1Q15118 436 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 MSS51Q4VC12 460 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 STXBP5Q5T5C0 1151 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 PDPK2PQ6A1A2 396 aa19.14■□□□□ 0.65
SMPD1-201ENST00000342245 MINDY2Q8NBR6 621 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms