RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 COQ4Q9Y3A0 265 aa12.85□□□□□ -0.35
PKP2-202ENST00000340811 IPPQ9Y573 584 aa12.85□□□□□ -0.35
PKP2-202ENST00000340811 CNTNAP2Q9UHC6 1331 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 DDX3YO15523 660 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 SLC2A3P11169 496 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 IRAK1P51617 712 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 CENPCQ03188 943 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ZC3H12AQ5D1E8 599 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 RAB44Q7Z6P3 723 aaPredicted RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 MSL3Q8N5Y2 521 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 ATP6V0D2Q8N8Y2 350 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 DDI1Q8WTU0 396 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 DEPDC1BQ8WUY9 529 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 EXT2Q93063 718 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 PTPN18Q99952 460 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 NEUROG2Q9H2A3 272 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 PABPC3Q9H361 631 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 DPEP3Q9H4B8 488 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 UBP1Q9NZI7 540 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 B4GALT4O60513 344 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 BANF1O75531 89 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 USP17L7P0C7H9 530 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 MMP8P22894 467 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 LMO2P25791 158 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 FNTAP49354 379 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ZNF792Q3KQV3 632 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 TAPT1Q6NXT6 567 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ILDR2Q71H61 639 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 FBXL18Q96ME1 805 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 PRR23AA6NEV1 266 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 CHN1P15882 459 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 AMPD1P23109 780 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 SH3PXD2AQ5TCZ1 1133 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 SAPCD2Q86UD0 394 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 PRMT1Q99873 361 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 CIPCQ9C0C6 399 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.84□□□□□ -0.35
PKP2-202ENST00000340811 TRPV6Q9H1D0 765 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 CATSPERBQ9H7T0 1116 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 AVENQ9NQS1 362 aaPredicted RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 NCANO14594 1321 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 COL4A5P29400 1685 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 KCNK1O00180 336 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ATG7O95352 703 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 SHBGP04278 402 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ERBB2P04626 1255 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 MAP2K2P36507 400 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ETFBP38117 255 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 ZNF177Q13360 481 aaPredicted RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 TARBP2Q15633 366 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 TAS2R42Q7RTR8 314 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 PIGZQ86VD9 579 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 C7orf61Q8IZ16 206 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 CELF6Q96J87 481 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 MRPL17Q9NRX2 175 aaKnown RBP12.84□□□□□ -0.35
PKP2-202ENST00000340811 FAM105AQ9NUU6 356 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 AP4E1Q9UPM8 1137 aa12.84□□□□□ -0.35
PKP2-202ENST00000340811 MYH15Q9Y2K3 1946 aa12.83□□□□□ -0.35
PKP2-202ENST00000340811 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 COL2A1P02458 1487 aaPredicted RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 UBA6A0AVT1 1052 aaPredicted RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 TULP2O00295 520 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 MAP2K7O14733 419 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 IQCF3P0C7M6 154 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TROVE2P10155 538 aaKnown RBP eCLIP12.83□□□□□ -0.36
PKP2-202ENST00000340811 PAPOLAP51003 745 aaKnown RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 IL9RQ01113 521 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 ITIH5Q86UX2 942 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 GPR152Q8TDT2 470 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 GDF3Q9NR23 364 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TRMT13Q9NUP7 481 aaKnown RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 KLHL14Q9P2G3 628 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 G3BP2Q9UN86 482 aaKnown RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 CCDC195A0A1B0GUA6 201 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 C3orf70A6NLC5 250 aaPredicted RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 A6NNZ2 444 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 RAD23BP54727 409 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 IFI35P80217 286 aaPredicted RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 CNGA2Q16280 664 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TUBB8Q3ZCM7 444 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TXNRD3NBQ6F5E7 133 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TMC3Q7Z5M5 1100 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 GPR88Q9GZN0 384 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 KIAA1551Q9HCM1 1747 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 UNCXA6NJT0 531 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 F9P00740 461 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 CD48P09326 243 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 EDNRBP24530 442 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 BST2Q10589 180 aaKnown RBP12.83□□□□□ -0.36
PKP2-202ENST00000340811 SLC39A12Q504Y0 691 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 PPM1LQ5SGD2 360 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 TTC23LQ6PF05 361 aa12.83□□□□□ -0.36
PKP2-202ENST00000340811 GIPC2Q8TF65 315 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms