RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 NEDD8-MDP1E9PL57 170 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 DNTTP04053 509 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 RPL17P18621 184 aaKnown RBP13.27□□□□□ -0.28
LIN54-201ENST00000340417 NR1I3Q14994 352 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 RAP1GAP2Q684P5 730 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 PRSS55Q6UWB4 352 aaPredicted RBP13.27□□□□□ -0.28
LIN54-201ENST00000340417 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 CHP1Q99653 195 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 PYGLP06737 847 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 CCT5P48643 541 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 MARC1Q5VT66 337 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 SUGP1Q8IWZ8 645 aaKnown RBP13.27□□□□□ -0.28
LIN54-201ENST00000340417 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.28
LIN54-201ENST00000340417 STMN2Q93045 179 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 THAP2Q9H0W7 228 aa13.27□□□□□ -0.28
LIN54-201ENST00000340417 ALG13Q9NP73 1137 aaKnown RBP13.27□□□□□ -0.28
LIN54-201ENST00000340417 HEATR9A2RTY3 570 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 COPEO14579 308 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 COPS2P61201 443 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 MBTD1Q05BQ5 628 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 CUL1Q13616 776 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 ERMARDQ5T6L9 678 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 GRAMD4Q6IC98 578 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 OTOP3Q7RTS5 596 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 FAM124AQ86V42 546 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 OSBPL9Q96SU4 736 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 DEC1Q9P2X7 70 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 ANO9A1A5B4 782 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 ITGALP20701 1170 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 ARL2P36404 184 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 BCL2L1Q07817 233 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 IRF5Q13568 498 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 ZNF268Q14587 947 aaPredicted RBP13.27□□□□□ -0.29
LIN54-201ENST00000340417 GRIN3AQ8TCU5 1115 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 ELMO2Q96JJ3 720 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 SENP1Q9P0U3 644 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 CLDN5O00501 218 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 IL1BP01584 269 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 CLCN1P35523 988 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 POLR2LP62875 67 aaKnown RBP13.27□□□□□ -0.29
LIN54-201ENST00000340417 CLEC16AQ2KHT3 1053 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 LPCAT1Q8NF37 534 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 NKX2-4Q9H2Z4 354 aa13.27□□□□□ -0.29
LIN54-201ENST00000340417 DHX33Q9H6R0 707 aaKnown RBP13.27□□□□□ -0.29
LIN54-201ENST00000340417 GTPBP10A4D1E9 387 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 PDZK1P1A8MUH7 402 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 F8VZ95 297 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 TRDMT1O14717 391 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 MAP3K6O95382 1288 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 HSPA4LO95757 839 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 EIF2B5Q13144 721 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 BYSLQ13895 437 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 FAM46CQ5VWP2 391 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 CHRDL2Q6WN34 429 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 RSPH1Q8WYR4 309 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 TSPAN17Q96FV3 270 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 SHDQ96IW2 340 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 C20orf96Q9NUD7 363 aaPredicted RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 GTSE1Q9NYZ3 720 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 UBA2Q9UBT2 640 aaPredicted RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 RASGRF2O14827 1237 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 ATP1A1P05023 1023 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 ADRB2P07550 413 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 KDSRQ06136 332 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 HIF1AQ16665 826 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 IRAK1BP1Q5VVH5 260 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 BTBD6Q96KE9 485 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 DDX47Q9H0S4 455 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 DUS2Q9NX74 493 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 ADGRA2Q96PE1 1338 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 E5RJQ4 531 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 GFAPP14136 432 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 FSHRP23945 695 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 GRSF1Q12849 480 aaKnown RBP eCLIP13.26□□□□□ -0.29
LIN54-201ENST00000340417 TTLL9Q3SXZ7 439 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 VSTM1Q6UX27 236 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 FAM35AQ86V20 835 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 CCNYL1Q8N7R7 359 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 FAM118BQ9BPY3 351 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 C4AP0C0L4 1744 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 EBAG9O00559 213 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 MRPS25P82663 173 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 UGP2Q16851 508 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 FAM228AQ86W67 206 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 FAM71BQ8TC56 605 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 MAP10Q9P2G4 905 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 VPS9D1Q9Y2B5 631 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 RRM1P23921 792 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 PBX3P40426 434 aa13.26□□□□□ -0.29
LIN54-201ENST00000340417 AARS2Q5JTZ9 985 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 XPO7Q9UIA9 1087 aaKnown RBP13.26□□□□□ -0.29
LIN54-201ENST00000340417 DDX5P17844 614 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 CYP3A5P20815 502 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 TYK2P29597 1187 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 ZC3H12AQ5D1E8 599 aaKnown RBP13.25□□□□□ -0.29
LIN54-201ENST00000340417 DOK6Q6PKX4 331 aa13.25□□□□□ -0.29
LIN54-201ENST00000340417 C4orf22Q6V702 233 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms