RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 ZCCHC23Q6ZST2 131 aa15.2■□□□□ 0.02
RET-201ENST00000340058 ULK4Q96C45 1275 aa15.2■□□□□ 0.02
RET-201ENST00000340058 GRAMD1AQ96CP6 724 aa15.2■□□□□ 0.02
RET-201ENST00000340058 VCPIP1Q96JH7 1222 aa15.2■□□□□ 0.02
RET-201ENST00000340058 TUBGCP4Q9UGJ1 667 aa15.2■□□□□ 0.02
RET-201ENST00000340058 CORO7P57737 925 aa15.2■□□□□ 0.02
RET-201ENST00000340058 TTC30AQ86WT1 665 aa15.2■□□□□ 0.02
RET-201ENST00000340058 TMA16Q96EY4 203 aaKnown RBP15.2■□□□□ 0.02
RET-201ENST00000340058 APOBEC3GQ9HC16 384 aaKnown RBP15.2■□□□□ 0.02
RET-201ENST00000340058 SLC40A1Q9NP59 571 aa15.2■□□□□ 0.02
RET-201ENST00000340058 SIX2Q9NPC8 291 aa15.2■□□□□ 0.02
RET-201ENST00000340058 IARS2Q9NSE4 1012 aaKnown RBP15.2■□□□□ 0.02
RET-201ENST00000340058 EPS15L1Q9UBC2 864 aa15.2■□□□□ 0.02
RET-201ENST00000340058 CACNG4Q9UBN1 327 aa15.2■□□□□ 0.02
RET-201ENST00000340058 DDX20Q9UHI6 824 aaKnown RBP15.2■□□□□ 0.02
RET-201ENST00000340058 ZNF536O15090 1300 aa15.2■□□□□ 0.02
RET-201ENST00000340058 GOLGA8QA0A0J9YX86 632 aa15.2■□□□□ 0.02
RET-201ENST00000340058 GOLGA8OA6NCC3 632 aa15.2■□□□□ 0.02
RET-201ENST00000340058 GOLGA8NF8WBI6 632 aa15.2■□□□□ 0.02
RET-201ENST00000340058 AVILO75366 819 aa15.2■□□□□ 0.02
RET-201ENST00000340058 CHEK2O96017 543 aa15.2■□□□□ 0.02
RET-201ENST00000340058 AKR1A1P14550 325 aa15.2■□□□□ 0.02
RET-201ENST00000340058 SREBF2Q12772 1141 aa15.2■□□□□ 0.02
RET-201ENST00000340058 PDK2Q15119 407 aa15.2■□□□□ 0.02
RET-201ENST00000340058 ICE2Q659A1 982 aa15.2■□□□□ 0.02
RET-201ENST00000340058 IQSEC1Q6DN90 963 aa15.2■□□□□ 0.02
RET-201ENST00000340058 MTHFD1LQ6UB35 978 aa15.2■□□□□ 0.02
RET-201ENST00000340058 FAM129AQ9BZQ8 928 aa15.2■□□□□ 0.02
RET-201ENST00000340058 TSPYL2Q9H2G4 693 aaPredicted RBP15.2■□□□□ 0.02
RET-201ENST00000340058 XAB2Q9HCS7 855 aaKnown RBP15.2■□□□□ 0.02
RET-201ENST00000340058 BAG5Q9UL15 447 aa15.2■□□□□ 0.02
RET-201ENST00000340058 PCDHB7Q9Y5E2 793 aa15.2■□□□□ 0.02
RET-201ENST00000340058 SPDYE5A6NIY4 337 aa15.19■□□□□ 0.02
RET-201ENST00000340058 MMP14P50281 582 aa15.19■□□□□ 0.02
RET-201ENST00000340058 SLC6A3Q01959 620 aa15.19■□□□□ 0.02
RET-201ENST00000340058 PPP1R26Q5T8A7 1209 aaPredicted RBP15.19■□□□□ 0.02
RET-201ENST00000340058 TTC39BQ5VTQ0 682 aaPredicted RBP15.19■□□□□ 0.02
RET-201ENST00000340058 TCP10LQ8TDR4 215 aa15.19■□□□□ 0.02
RET-201ENST00000340058 SH3TC2Q8TF17 1288 aa15.19■□□□□ 0.02
RET-201ENST00000340058 DHX33Q9H6R0 707 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 CD248Q9HCU0 757 aa15.19■□□□□ 0.02
RET-201ENST00000340058 NT5MQ9NPB1 228 aa15.19■□□□□ 0.02
RET-201ENST00000340058 CDY2AQ9Y6F7 541 aa15.19■□□□□ 0.02
RET-201ENST00000340058 DCDC2CA8MYV0 355 aa15.19■□□□□ 0.02
RET-201ENST00000340058 GNGT2O14610 69 aa15.19■□□□□ 0.02
RET-201ENST00000340058 DHX15O43143 795 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 ADRA1DP25100 572 aa15.19■□□□□ 0.02
RET-201ENST00000340058 MGAT1P26572 445 aa15.19■□□□□ 0.02
RET-201ENST00000340058 PLIN5Q00G26 463 aa15.19■□□□□ 0.02
RET-201ENST00000340058 FAAP100Q0VG06 881 aa15.19■□□□□ 0.02
RET-201ENST00000340058 HSP90AA5PQ58FG0 334 aa15.19■□□□□ 0.02
RET-201ENST00000340058 NLRP9Q7RTR0 991 aa15.19■□□□□ 0.02
RET-201ENST00000340058 GPR152Q8TDT2 470 aa15.19■□□□□ 0.02
RET-201ENST00000340058 MRPL45Q9BRJ2 306 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 TUBB6Q9BUF5 446 aa15.19■□□□□ 0.02
RET-201ENST00000340058 IL1RL2Q9HB29 575 aa15.19■□□□□ 0.02
RET-201ENST00000340058 LATS2Q9NRM7 1088 aa15.19■□□□□ 0.02
RET-201ENST00000340058 RBM22Q9NW64 420 aaKnown RBP eCLIP15.19■□□□□ 0.02
RET-201ENST00000340058 PCDHA2Q9Y5H9 948 aa15.19■□□□□ 0.02
RET-201ENST00000340058 SDR42E2A6NKP2 422 aa15.19■□□□□ 0.02
RET-201ENST00000340058 BUD23O43709 281 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 ONECUT3O60422 494 aaPredicted RBP15.19■□□□□ 0.02
RET-201ENST00000340058 CFHP08603 1231 aa15.19■□□□□ 0.02
RET-201ENST00000340058 TAF5Q15542 800 aa15.19■□□□□ 0.02
RET-201ENST00000340058 PDCD2Q16342 344 aaPredicted RBP15.19■□□□□ 0.02
RET-201ENST00000340058 FAM171A1Q5VUB5 890 aa15.19■□□□□ 0.02
RET-201ENST00000340058 C16orf46Q6P387 395 aa15.19■□□□□ 0.02
RET-201ENST00000340058 TFAP2BQ92481 460 aa15.19■□□□□ 0.02
RET-201ENST00000340058 SNRNP25Q9BV90 132 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 TXNRD2Q9NNW7 524 aa15.19■□□□□ 0.02
RET-201ENST00000340058 WDR27A2RRH5 827 aa15.19■□□□□ 0.02
RET-201ENST00000340058 RNF103O00237 685 aa15.19■□□□□ 0.02
RET-201ENST00000340058 SKIP12755 728 aa15.19■□□□□ 0.02
RET-201ENST00000340058 RPL22P35268 128 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 CNGA2Q16280 664 aa15.19■□□□□ 0.02
RET-201ENST00000340058 FSCBQ5H9T9 825 aa15.19■□□□□ 0.02
RET-201ENST00000340058 LPIN3Q9BQK8 851 aa15.19■□□□□ 0.02
RET-201ENST00000340058 DMAC2Q9NW81 257 aa15.19■□□□□ 0.02
RET-201ENST00000340058 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.19■□□□□ 0.02
RET-201ENST00000340058 SUN2Q9UH99 717 aa15.19■□□□□ 0.02
RET-201ENST00000340058 PARP4Q9UKK3 1724 aaKnown RBP15.19■□□□□ 0.02
RET-201ENST00000340058 ROBO1Q9Y6N7 1651 aa15.18■□□□□ 0.02
RET-201ENST00000340058 CASQ2O14958 399 aaPredicted RBP15.18■□□□□ 0.02
RET-201ENST00000340058 FANCGO15287 622 aa15.18■□□□□ 0.02
RET-201ENST00000340058 TREHO43280 583 aa15.18■□□□□ 0.02
RET-201ENST00000340058 ARIH2O95376 493 aa15.18■□□□□ 0.02
RET-201ENST00000340058 KBTBD12Q3ZCT8 623 aa15.18■□□□□ 0.02
RET-201ENST00000340058 STRA8Q7Z7C7 330 aa15.18■□□□□ 0.02
RET-201ENST00000340058 KATNAL2Q8IYT4 538 aa15.18■□□□□ 0.02
RET-201ENST00000340058 RFWD2Q8NHY2 731 aa15.18■□□□□ 0.02
RET-201ENST00000340058 TMEM169Q96HH4 297 aa15.18■□□□□ 0.02
RET-201ENST00000340058 MBOAT7Q96N66 472 aa15.18■□□□□ 0.02
RET-201ENST00000340058 GRID1Q9ULK0 1009 aa15.18■□□□□ 0.02
RET-201ENST00000340058 SIGLEC16A6NMB1 481 aa15.18■□□□□ 0.02
RET-201ENST00000340058 DNAJC6O75061 913 aa15.18■□□□□ 0.02
RET-201ENST00000340058 NDUFS3O75489 264 aa15.18■□□□□ 0.02
RET-201ENST00000340058 ELNP15502 786 aa15.18■□□□□ 0.02
RET-201ENST00000340058 WEE1P30291 646 aa15.18■□□□□ 0.02
RET-201ENST00000340058 CD52P31358 61 aa15.18■□□□□ 0.02
RET-201ENST00000340058 SGO1Q5FBB7 561 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms