RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 AMPD1P23109 780 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 SSTR1P30872 391 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 TKTL1P51854 596 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 ACAP1Q15027 740 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 EFTUD2Q15029 972 aaKnown RBP eCLIP16.1■□□□□ 0.172e-6■■■■■ 37.3
MBD1-203ENST00000339998 QPCTQ16769 361 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 SPDYCQ5MJ68 293 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 OTUD1Q5VV17 481 aaPredicted RBP16.1■□□□□ 0.17
MBD1-203ENST00000339998 TOP6BLQ8N6T0 577 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 KCTD15Q96SI1 283 aaPredicted RBP16.1■□□□□ 0.17
MBD1-203ENST00000339998 SMOQ99835 787 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 SYT15Q9BQS2 421 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 YJEFN3A6XGL0 299 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 E7ENQ6 273 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 KCNN4O15554 427 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 KPNA6O60684 536 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 AP1G2O75843 785 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 USP17L7P0C7H9 530 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 SETSIPP0DME0 302 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 CYP2F1P24903 491 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 L1CAMP32004 1257 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 SULT1E1P49888 294 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 BCAR1P56945 870 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 EDEM1Q92611 657 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 PGM2Q96G03 612 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 HNRNPABQ99729 332 aaKnown RBP16.1■□□□□ 0.17
MBD1-203ENST00000339998 CEP41Q9BYV8 373 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 ULBP1Q9BZM6 244 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 VPS37BQ9H9H4 285 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 ANLNQ9NQW6 1124 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 AP4E1Q9UPM8 1137 aa16.1■□□□□ 0.17
MBD1-203ENST00000339998 GPR182O15218 404 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 MBTPS1Q14703 1052 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 NOMO1Q15155 1222 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 UPP1Q16831 310 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 C6orf118Q5T5N4 469 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 ERMARDQ5T6L9 678 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 CCDC110Q8TBZ0 833 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 ARHGEF2Q92974 986 aaKnown RBP16.09■□□□□ 0.17
MBD1-203ENST00000339998 RTP3Q9BQQ7 232 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 C11orf84Q9BUA3 381 aaPredicted RBP16.09■□□□□ 0.17
MBD1-203ENST00000339998 KIF9Q9HAQ2 790 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 LRRC4Q9HBW1 653 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 DPYSL4O14531 572 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 ACLYP53396 1101 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 ROR1Q01973 937 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 BOLA3Q53S33 107 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 RTN4RL1Q86UN2 441 aaPredicted RBP16.09■□□□□ 0.17
MBD1-203ENST00000339998 IGDCC3Q8IVU1 814 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 STK32AQ8WU08 396 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 TRIM56Q9BRZ2 755 aaKnown RBP16.09■□□□□ 0.17
MBD1-203ENST00000339998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.09■□□□□ 0.17
MBD1-203ENST00000339998 CWC15Q9P013 229 aaKnown RBP16.09■□□□□ 0.17
MBD1-203ENST00000339998 EFR3BQ9Y2G0 817 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 FARP1Q9Y4F1 1045 aaPredicted RBP16.09■□□□□ 0.17
MBD1-203ENST00000339998 NUP205Q92621 2012 aa16.09■□□□□ 0.17
MBD1-203ENST00000339998 I6L893 689 aaPredicted RBP16.08■□□□□ 0.17
MBD1-203ENST00000339998 XPO1O14980 1071 aaKnown RBP16.08■□□□□ 0.17
MBD1-203ENST00000339998 OR4Q2P0C623 313 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 CAV1Q03135 178 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 MPP2Q14168 576 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 BBS9Q3SYG4 887 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 EMC10Q5UCC4 262 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 CCT8L2Q96SF2 557 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 USP29Q9HBJ7 922 aa16.08■□□□□ 0.17
MBD1-203ENST00000339998 M0QYT0 321 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 FYNP06241 537 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 MRPS5P82675 430 aaKnown RBP16.08■□□□□ 0.16
MBD1-203ENST00000339998 CD300LGQ6UXG3 332 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 LRRTM3Q86VH5 581 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 NLRP14Q86W24 1093 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 ZNF280BQ86YH2 543 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 ANKRD42Q8N9B4 389 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 NAT8LQ8N9F0 302 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 EPN3Q9H201 632 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 NRDE2Q9H7Z3 1164 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 SNX10Q9Y5X0 201 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 APOL1O14791 398 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 CREB3O43889 395 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 BDNFP23560 247 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 GCAP28676 217 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 GPX6P59796 221 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 TMED2Q15363 201 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 FAM35AQ86V20 835 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 SRRM1Q8IYB3 904 aaKnown RBP16.08■□□□□ 0.16
MBD1-203ENST00000339998 SIX6OS1Q8N1H7 587 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 TTC13Q8NBP0 860 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 SMC1BQ8NDV3 1235 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 MYCBPAPQ8TBZ2 947 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 PIGVQ9NUD9 493 aa16.08■□□□□ 0.16
MBD1-203ENST00000339998 XPO7Q9UIA9 1087 aaKnown RBP16.08■□□□□ 0.16
MBD1-203ENST00000339998 TET1Q8NFU7 2136 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 FAM200BP0CF97 657 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 MMP13P45452 471 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 YWHAZP63104 245 aaKnown RBP16.07■□□□□ 0.16
MBD1-203ENST00000339998 NOGQ13253 232 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 MORF4L2Q15014 288 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 HIF1AQ16665 826 aa16.07■□□□□ 0.16
MBD1-203ENST00000339998 DEFB115Q30KQ5 88 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms