RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 NME3Q13232 169 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 MTMR3Q13615 1198 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 KRT81Q14533 505 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 FAXCQ5TGI0 409 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 DRICH1Q6PGQ1 229 aaPredicted RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 LRIG3Q6UXM1 1119 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF598Q86UK7 904 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 SCAMP5Q8TAC9 235 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 EDEM1Q92611 657 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 RUNDC3BQ96NL0 473 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 RBM15Q96T37 977 aaKnown RBP eCLIP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 MAK16Q9BXY0 300 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 ULBP1Q9BZM6 244 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM124BQ9H5Z6 455 aaPredicted RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 STARD7Q9NQZ5 370 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 SLC38A7Q9NVC3 462 aa7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.72□□□□□ -1.17
SRFBP1-201ENST00000339397 MYO18AQ92614 2054 aaKnown RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 F5H423 210 aaPredicted RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM72CH0Y354 149 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 APOC4-APOC2K7ER74 178 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 APOC2P02655 101 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 NUDT17P0C025 328 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 SETSIPP0DME0 302 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 GOT1P17174 413 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 AMPD1P23109 780 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 GRK4P32298 578 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 APLP1P51693 650 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 SEC24CP53992 1094 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 MRPS5P82675 430 aaKnown RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 IFRD2Q12894 506 aaPredicted RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 ACAP1Q15027 740 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 ERMARDQ5T6L9 678 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM72AQ5TYM5 149 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM72DQ6L9T8 149 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 FAM72BQ86X60 149 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 HS6ST3Q8IZP7 471 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 CYP4X1Q8N118 509 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 CENPIQ92674 756 aaPredicted RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 MRRFQ96E11 262 aaKnown RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 CAPS2Q9BXY5 557 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 USP29Q9HBJ7 922 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 HMX1Q9NP08 348 aaPredicted RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 NINJ2Q9NZG7 142 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 TBK1Q9UHD2 729 aa7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 DRG1Q9Y295 367 aaKnown RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 PRG3Q9Y2Y8 225 aaPredicted RBP7.71□□□□□ -1.17
SRFBP1-201ENST00000339397 ZNF638Q14966 1978 aaKnown RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 C9IYK1 514 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 HHLA1C9JL84 531 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 DNALI1O14645 258 aaPredicted RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 NBNO60934 754 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 AVILO75366 819 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 TTC4O95801 387 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 CTCFP49711 727 aaPredicted RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 YWHAZP63104 245 aaKnown RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 GNGT1P63211 74 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 BOLA3Q53S33 107 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 FNBP1LQ5T0N5 605 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 RNASEH2BQ5TBB1 312 aaKnown RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 SDHAF4Q5VUM1 108 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM35AQ86V20 835 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 ANKMY2Q8IV38 441 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 CCDC13Q8IYE1 715 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 CPT1BQ92523 772 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 P3H4Q92791 437 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 MYLPFQ96A32 169 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 HSFY1Q96LI6 401 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 KCTD15Q96SI1 283 aaPredicted RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 WDR83Q9BRX9 315 aaKnown RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 UNC93B1Q9H1C4 597 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 LRRC4Q9HBW1 653 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 PIGVQ9NUD9 493 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 PSD3Q9NYI0 1048 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 CWC15Q9P013 229 aaKnown RBP7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 NUDT5Q9UKK9 219 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 TRIM17Q9Y577 477 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 SNX10Q9Y5X0 201 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 XIRP2A4UGR9 3374 aa7.71□□□□□ -1.18
SRFBP1-201ENST00000339397 GOLGA6L10A6NI86 522 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 M0QYT0 321 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 DPYSL4O14531 572 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 TMEM63AO94886 807 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM200BP0CF97 657 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 CYP2F1P24903 491 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 HOXD10P28358 340 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 RBL1P28749 1068 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 MATKP42679 507 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SULT1E1P49888 294 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 ATN1P54259 1190 aaPredicted RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SLMAPQ14BN4 828 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 DARS2Q6PI48 645 aaKnown RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SYDE1Q6ZW31 735 aaPredicted RBP7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 DBF4BQ8NFT6 615 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 MYCBPAPQ8TBZ2 947 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 RSAD2Q8WXG1 361 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 RSPH1Q8WYR4 309 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 SAYSD1Q9NPB0 183 aa7.7□□□□□ -1.18
SRFBP1-201ENST00000339397 TPX2Q9ULW0 747 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms