RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 SLC1A5Q15758 541 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZKSCAN8Q15776 578 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GALNTL6Q49A17 601 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BOLA3Q53S33 107 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FAM47CQ5HY64 1035 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLC26A9Q7LBE3 791 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 VSIG1Q86XK7 387 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 C4orf33Q8N1A6 199 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ATP11CQ8NB49 1132 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 OR6B3Q8NGW1 331 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FBF1Q8TES7 1133 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DYDC1Q8WWB3 177 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TGS1Q96RS0 853 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MIS12Q9H081 205 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GDAP2Q9NXN4 497 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SAMD15Q9P1V8 674 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PSMC3IPQ9P2W1 217 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 HESX1Q9UBX0 185 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 UBQLN1Q9UMX0 589 aaKnown RBP13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TEX264Q9Y6I9 313 aa13.52□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRIP12Q14669 1992 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GOLGA6L7A0A1B0GV03 622 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CLGNO14967 610 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MAP3K6O95382 1288 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PDGFRBP09619 1106 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 L1CAMP32004 1257 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RPA3P35244 121 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MAGEA6P43360 314 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 YARSP54577 528 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GEMIN4P57678 1058 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RNASELQ05823 741 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLC10A2Q12908 348 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NR1H3Q13133 447 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MAP2K5Q13163 448 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 IRF5Q13568 498 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PCBP1Q15365 356 aaKnown RBP eCLIP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BBS9Q3SYG4 887 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 FBXO47Q5MNV8 452 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 COL13A1Q5TAT6 717 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NUGGCQ68CJ6 796 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DARS2Q6PI48 645 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ADGRD1Q6QNK2 874 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PPP1R21Q6ZMI0 780 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RGS9BPQ6ZS82 235 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TRPM8Q7Z2W7 1104 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZNF276Q8N554 614 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ANKRD52Q8NB46 1076 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SGSM3Q96HU1 749 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TBCBQ99426 244 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PAFAH2Q99487 392 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ARHGAP39Q9C0H5 1083 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SLC40A1Q9NP59 571 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GTF2IRD1Q9UHL9 959 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PIN4Q9Y237 131 aaKnown RBP13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 USP3Q9Y6I4 520 aa13.51□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BCLAF3A2AJT9 711 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 A8MXQ7 604 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZNF487B1APH4 448 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DNAJC8O75937 253 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TSHRP16473 764 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 TGM2P21980 687 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RBL1P28749 1068 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ADORA2BP29275 332 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 AXLP30530 894 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SDC4P31431 198 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 STIP1P31948 543 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SCNN1AP37088 669 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BASP1P80723 227 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CDC42EP1Q00587 391 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CAP1Q01518 475 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 XRCC4Q13426 336 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KRT81Q14533 505 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MTFR1Q15390 333 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 DPYSL2Q16555 572 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SYCP2LQ5T4T6 812 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SCYL2Q6P3W7 929 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ARHGEF18Q6ZSZ5 1173 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 C3orf62Q6ZUJ4 267 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MRRFQ96E11 262 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 RMDN2Q96LZ7 410 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KCTD15Q96SI1 283 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ZNF670Q9BS34 389 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NSRP1Q9H0G5 558 aaKnown RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PPCSQ9HAB8 311 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 NKIRAS1Q9NYS0 192 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CHMP2BQ9UQN3 213 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 MFHAS1Q9Y4C4 1052 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 KPNA7A9QM74 516 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 SMAPO00193 183 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 PTGESO14684 152 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 APOL1O14791 398 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 CHADO15335 359 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ATP2C2O75185 946 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 AVILO75366 819 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 STX2P32856 288 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 ELK3P41970 407 aa13.5□□□□□ -0.25
CDK5RAP1-201ENST00000339269 BCAT1P54687 386 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms