RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 YJEFN3A6XGL0 299 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 GOLGA8KD6RF30 607 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 E7ENQ6 273 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 APOC4-APOC2K7ER74 178 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 APOC2P02655 101 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 SHBGP04278 402 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 NRLP54845 237 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 BCAR1P56945 870 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 GPS1Q13098 491 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 TCTN1Q2MV58 587 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 ZC3H18Q86VM9 953 aaKnown RBP23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 MAP7D3Q8IWC1 876 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 TAB3Q8N5C8 712 aaPredicted RBP23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 TEKT4Q8WW24 435 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 SMARCD1Q96GM5 515 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 SCLYQ96I15 445 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 TMPRSS4Q9NRS4 437 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 NAALADL1Q9UQQ1 740 aa23.39■■□□□ 1.33
PDLIM2-203ENST00000339162 ENPP3O14638 875 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 OR4Q2P0C623 313 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 EIF3EP60228 445 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 DSC1Q08554 894 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 BFSP2Q13515 415 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 SLC29A2Q14542 456 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 SKIDA1Q1XH10 827 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 ANKRD20A8PQ5CZ79 823 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 DNAJC21Q5F1R6 531 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 FAM171BQ6P995 826 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 COLGALT2Q8IYK4 626 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 TTC13Q8NBP0 860 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 URGCPQ8TCY9 931 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 FTHL17Q9BXU8 183 aa23.38■■□□□ 1.33
PDLIM2-203ENST00000339162 MDM4O15151 490 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 PDK2Q15119 407 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 SLC25A52Q3SY17 297 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 OTUD1Q5VV17 481 aaPredicted RBP23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 LRIG3Q6UXM1 1119 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 PYROXD2Q8N2H3 581 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 PQLC3Q8N755 202 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 PCDH19Q8TAB3 1148 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 ADAM32Q8TC27 787 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 LRRN4Q8WUT4 740 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 ADAM7Q9H2U9 754 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 AP4E1Q9UPM8 1137 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 TET1Q8NFU7 2136 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 HHLA1C9JL84 531 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 DAB1O75553 588 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 CCL5P13501 91 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 NME3Q13232 169 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 UNC45BQ8IWX7 931 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 HCSTQ9UBK5 93 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 DSEQ9UL01 958 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 HEY1Q9Y5J3 304 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 TSC2P49815 1807 aa23.37■■□□□ 1.33
PDLIM2-203ENST00000339162 FYNP06241 537 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 RBP3P10745 1247 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 L1CAMP32004 1257 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 DAOAP59103 153 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 YWHAHQ04917 246 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 PLEKHG4Q58EX7 1191 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 P3H4Q92791 437 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 FAM193BQ96PV7 902 aaPredicted RBP23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 PKMYT1Q99640 499 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 TMEM161AQ9NX61 479 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 M0QYT0 321 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 RARGP13631 454 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 NOS2P35228 1153 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 CCL23P55773 120 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 IFFO1Q0D2I5 559 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 SLMAPQ14BN4 828 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 THEM5Q8N1Q8 247 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 PLD5Q8N7P1 536 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 FAM71DQ8N9W8 422 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 RSAD2Q8WXG1 361 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 BEGAINQ9BUH8 593 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 POPDC2Q9HBU9 364 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 MTMR10Q9NXD2 777 aa23.36■■□□□ 1.33
PDLIM2-203ENST00000339162 CAPN9O14815 690 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 MCF2LO15068 1137 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 TFDP2Q14188 446 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 RAB41Q5JT25 222 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 DENND2CQ68D51 928 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 STRADAQ7RTN6 431 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 KCTD15Q96SI1 283 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 CDC42EP4Q9H3Q1 356 aaKnown RBP23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 MYZAPP0CAP1 466 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 HIBCHQ6NVY1 386 aaPredicted RBP23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 ABI1Q8IZP0 508 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 CCDC33Q8N5R6 958 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 FAM76AQ8TAV0 307 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 EDEM1Q92611 657 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 NPY6RQ99463 290 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 PPP1R12CQ9BZL4 782 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 FAM129AQ9BZQ8 928 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 TMBIM4Q9HC24 238 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 CSNK1G1Q9HCP0 422 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 BCCIPQ9P287 314 aaKnown RBP eCLIP23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 PCDHB7Q9Y5E2 793 aa23.35■■□□□ 1.33
PDLIM2-203ENST00000339162 GOLGA6L10A6NI86 522 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms