RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ANKRD23Q86SG2 305 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 ARID3BQ8IVW6 561 aaPredicted RBP6.52□□□□□ -1.37
PRKDC-202ENST00000338368 TTC8Q8TAM2 541 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 STARD7Q9NQZ5 370 aa6.52□□□□□ -1.37
PRKDC-202ENST00000338368 CCDC130P13994 396 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 RAB27AP51159 221 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SLC39A4Q6P5W5 647 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 KCNT2Q6UVM3 1135 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 BBS12Q6ZW61 710 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 COLGALT1Q8NBJ5 622 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 HTR3CQ8WXA8 447 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SOCS4Q8WXH5 440 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 NXF3Q9H4D5 531 aaKnown RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 TRPA1O75762 1119 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ARIH2O95376 493 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ALDH2P05091 517 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 TPD52P55327 224 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 RGMBQ6NW40 437 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 PARP9Q8IXQ6 854 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 CYP4F11Q9HBI6 524 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 KRT82Q9NSB4 513 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 STOML1Q9UBI4 398 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SMIM28A0A1B0GU29 152 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 AGPSO00116 658 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ATG7O95352 703 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 PEX5P50542 639 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 OVOS1Q6IE37 1185 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 B3GNT9Q6UX72 402 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 CHSY1Q86X52 802 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 MIB1Q86YT6 1006 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SLC25A41Q8N5S1 370 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SENP8Q96LD8 212 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ADAM2Q99965 735 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SKIP12755 728 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 DARSP14868 501 aaKnown RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 RNF135Q8IUD6 432 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 MAGEB18Q96M61 343 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 CPXM1Q96SM3 734 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 A0A0G2JLL6 359 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 VGLL3A8MV65 326 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 NLRP9Q7RTR0 991 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 PRRT2Q7Z6L0 340 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 MAML3Q96JK9 1138 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 LRRC40Q9H9A6 602 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 XPAP23025 273 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SCNN1GP51170 649 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 MBTD1Q05BQ5 628 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ENPEPQ07075 957 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 NFE2Q16621 373 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 COL1A2P08123 1366 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 PCSK7Q16549 785 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 FASTKD1Q53R41 847 aaKnown RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ZC3H12AQ5D1E8 599 aaKnown RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 NPNTQ6UXI9 565 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF512Q96ME7 567 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SMIM35A0A1B0GVV1 85 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SRRM3A6NNA2 597 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 OCRLQ01968 901 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 FAM183BPQ6ZVS7 135 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 HIPK4Q8NE63 616 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 LMO3Q8TAP4 145 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ADAM32Q8TC27 787 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 HNRNPCL1O60812 293 aaKnown RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 DIAPH2O60879 1101 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 MTA2O94776 668 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 CHEK2O96017 543 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 C10orf120Q5SQS8 335 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 LCLAT1Q6UWP7 414 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ARHGAP18Q8N392 663 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 FAM161BQ96MY7 647 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 CEP41Q9BYV8 373 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 TRPM3Q9HCF6 1732 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 E2F8A0AVK6 867 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ALOX15BO15296 676 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 ANXA9O76027 345 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 RGS20O76081 388 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 PCBP1Q15365 356 aaKnown RBP eCLIP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 PPP1R26Q5T8A7 1209 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 SKA2Q8WVK7 121 aaPredicted RBP6.51□□□□□ -1.37
PRKDC-202ENST00000338368 EFR3BQ9Y2G0 817 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 STXBP5LQ9Y2K9 1186 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 DERAQ9Y315 318 aa6.51□□□□□ -1.37
PRKDC-202ENST00000338368 C22orf31O95567 290 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SLC2A3P11169 496 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ACAD11Q709F0 780 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 SPATA24Q86W54 205 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TMEM86AQ8N2M4 240 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 MARCOQ9UEW3 520 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 MMP3P08254 477 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 XYLT1Q86Y38 959 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ATP6V0D2Q8N8Y2 350 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 RRN3Q9NYV6 651 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TRUB2O95900 331 aaKnown RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 BRCC3P46736 316 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 WSCD1Q658N2 575 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF572Q7Z3I7 529 aaPredicted RBP6.5□□□□□ -1.37
PRKDC-202ENST00000338368 EXOC3L1Q86VI1 746 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TFAP2BQ92481 460 aa6.5□□□□□ -1.37
PRKDC-202ENST00000338368 TRPV6Q9H1D0 765 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms