RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 UNCXA6NJT0 531 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 TMEM88BA6NKF7 163 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 CRADDP78560 199 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 ROR1Q01973 937 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 KYAT1Q16773 422 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 RNASEH2BQ5TBB1 312 aaKnown RBP13.11□□□□□ -0.31
LIMK1-201ENST00000336180 AGBL2Q5U5Z8 902 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 CPLX4Q7Z7G2 160 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 LRRC52Q8N7C0 313 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 PLD5Q8N7P1 536 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 ANKRD52Q8NB46 1076 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 SLCO2A1Q92959 643 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 RUNDC3BQ96NL0 473 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 ULBP1Q9BZM6 244 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 TRPV2Q9Y5S1 764 aa13.11□□□□□ -0.31
LIMK1-201ENST00000336180 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 WDR91A4D1P6 747 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 CA12O43570 354 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 KIF1CO43896 1103 aaKnown RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 CD4P01730 458 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 THP07101 528 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 GNAT1P11488 350 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 CYP2F1P24903 491 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 PBX3P40426 434 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 PKN2Q16513 984 aaKnown RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 TIGD5Q53EQ6 642 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 GPR152Q8TDT2 470 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 PRCCQ92733 491 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 ZNF560Q96MR9 790 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 RNF157Q96PX1 679 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 LGMNQ99538 433 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 SPC25Q9HBM1 224 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 LRRC4Q9HBW1 653 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 AP4E1Q9UPM8 1137 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 TTC3P53804 2025 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 M0QYT0 321 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 EBAG9O00559 213 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 B4GALT3O60512 393 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 AP1G2O75843 785 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 FAM155BO75949 473 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 APRTP07741 180 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 BRAFP15056 766 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 BDNFP23560 247 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 TKTL1P51854 596 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 EIF3BP55884 814 aaKnown RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 SV2CQ496J9 727 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 TMEM110Q86TL2 294 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 LRRC34Q8IZ02 419 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 FBXO36Q8NEA4 188 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 SPOCK2Q92563 424 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 FAF2Q96CS3 445 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 PCED1BQ96HM7 432 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 ANLNQ9NQW6 1124 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 HOMER3Q9NSC5 361 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 IL1RAPL1Q9NZN1 696 aa13.1□□□□□ -0.31
LIMK1-201ENST00000336180 PRG3Q9Y2Y8 225 aaPredicted RBP13.1□□□□□ -0.31
LIMK1-201ENST00000336180 YJEFN3A6XGL0 299 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 E7ENQ6 273 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 KRT15P19012 456 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 BCAT1P54687 386 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 HIF1AQ16665 826 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 SPRED3Q2MJR0 410 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 C6orf118Q5T5N4 469 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 TRMT10CQ7L0Y3 403 aaKnown RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 ZCCHC9Q8N567 271 aaKnown RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 SLC7A14Q8TBB6 771 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 PPP1R10Q96QC0 940 aaKnown RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 XPO6Q96QU8 1125 aaKnown RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 RPS6KL1Q9Y6S9 549 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 PDE4DIPQ5VU43 2346 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 GMNCA6NCL1 334 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FAM72CH0Y354 149 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 GPX6P59796 221 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FAM72AQ5TYM5 149 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FAM72DQ6L9T8 149 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 CLEC20AQ6ZU45 233 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 POLNQ7Z5Q5 900 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 RPAINQ86UA6 219 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FAM72BQ86X60 149 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 SIX6OS1Q8N1H7 587 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 TMLHEQ9NVH6 421 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 CCDC78A2IDD5 438 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 APOC4-APOC2K7ER74 178 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 APOL1O14791 398 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 CAPN9O14815 690 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 PPP1R12AO14974 1030 aaPredicted RBP13.09□□□□□ -0.31
LIMK1-201ENST00000336180 ZBED1O96006 694 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 APOC2P02655 101 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 IVLP07476 585 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 PPP1R2P3Q6NXS1 205 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 NME8Q8N427 588 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 ARFGAP2Q8N6H7 521 aa13.09□□□□□ -0.31
LIMK1-201ENST00000336180 FNIP1Q8TF40 1166 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms