RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CTC1Q2NKJ3 1217 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 CCDC149Q6ZUS6 474 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 ZNF564Q8TBZ8 553 aaPredicted RBP17.3■□□□□ 0.36
SHOX-201ENST00000334060 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 RNF38Q9H0F5 515 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 PLEKHA4Q9H4M7 779 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 ANLNQ9NQW6 1124 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 CNGB3Q9NQW8 809 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 HSFX1Q9UBD0 423 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 SCML2Q9UQR0 700 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 ANAPC1Q9H1A4 1944 aa17.3■□□□□ 0.36
SHOX-201ENST00000334060 I6L893 689 aaPredicted RBP17.29■□□□□ 0.36
SHOX-201ENST00000334060 PJA2O43164 708 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 LTFP02788 710 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 KRT3P12035 628 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 SP100P23497 879 aaPredicted RBP17.29■□□□□ 0.36
SHOX-201ENST00000334060 ATP11AP98196 1134 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 ZNF268Q14587 947 aaPredicted RBP17.29■□□□□ 0.36
SHOX-201ENST00000334060 CDO1Q16878 200 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 CCDC14Q49A88 953 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 ANKRD54Q6NXT1 300 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 SLC26A9Q7LBE3 791 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 SHKBP1Q8TBC3 707 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 RXFP2Q8WXD0 754 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 ZNF512Q96ME7 567 aaPredicted RBP17.29■□□□□ 0.36
SHOX-201ENST00000334060 ZSWIM3Q96MP5 696 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 SELENOOQ9BVL4 669 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 PRKD2Q9BZL6 878 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 ANAPC7Q9UJX3 599 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 ZNF840PA6NDX5 716 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 TMEM191CA6NGB0 347 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 ACADSBP45954 432 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 DCAF6Q58WW2 860 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 TXNRD3NBQ6F5E7 133 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 RIN3Q8TB24 985 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 SMG7Q92540 1137 aaKnown RBP17.29■□□□□ 0.36
SHOX-201ENST00000334060 CASP10Q92851 521 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 MYRFLQ96LU7 910 aa17.29■□□□□ 0.36
SHOX-201ENST00000334060 PACSIN2Q9UNF0 486 aaPredicted RBP17.29■□□□□ 0.36
SHOX-201ENST00000334060 C2CD4BA6NLJ0 364 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 SIGLEC16A6NMB1 481 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 BUB1BO60566 1050 aaPredicted RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 ZDHHC11BP0C7U3 371 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 CSH1P0DML2 217 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 CSH2P0DML3 217 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 NCAM1P13591 858 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 CEBPBP17676 345 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 POU3F3P20264 500 aaPredicted RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 KRT83P78385 493 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 SMYD5Q6GMV2 418 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 RFFLQ8WZ73 363 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 ACSF2Q96CM8 615 aaPredicted RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 TBCBQ99426 244 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 GAS2L1Q99501 681 aaPredicted RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 S1PR5Q9H228 398 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 GRID2IPA4D2P6 1211 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 CCP110O43303 1012 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 FOSL2P15408 326 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 NOP2P46087 812 aaKnown RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 GSCP56915 257 aaPredicted RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 YWHAZP63104 245 aaKnown RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 VEPH1Q14D04 833 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 TEAD2Q15562 447 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 TAF12Q16514 161 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 TAC4Q86UU9 113 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 VCPIP1Q96JH7 1222 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 SLC2A13Q96QE2 648 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 TRPC7Q9HCX4 862 aa17.28■□□□□ 0.36
SHOX-201ENST00000334060 AVENQ9NQS1 362 aaPredicted RBP17.28■□□□□ 0.36
SHOX-201ENST00000334060 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.36
SHOX-201ENST00000334060 RARGP13631 454 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 GGCXP38435 758 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 MESDQ14696 234 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 PRSS36Q5K4E3 855 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 DNTTIP2Q5QJE6 756 aaKnown RBP17.27■□□□□ 0.36
SHOX-201ENST00000334060 TTC16Q8NEE8 873 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 ATXN3LQ9H3M9 355 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 PARVAQ9NVD7 372 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.27■□□□□ 0.36
SHOX-201ENST00000334060 SMPD4Q9NXE4 827 aa17.27■□□□□ 0.36
SHOX-201ENST00000334060 COCHO43405 550 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 NCK2O43639 380 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 RTN3O95197 1032 aaPredicted RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 FTCDO95954 541 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 PDGFRAP16234 1089 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 MARCKSL1P49006 195 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 FAM193AP78312 1265 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 DCUN1D2Q6PH85 259 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 TMEM184AQ6ZMB5 413 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 MIB1Q86YT6 1006 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 ARL14EPQ8N8R7 260 aaPredicted RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 MAB21L3Q8N8X9 362 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 TPCN2Q8NHX9 752 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 DQX1Q8TE96 717 aaKnown RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 TRMT2BQ96GJ1 504 aaKnown RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 MSLNLQ96KJ4 702 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 PEBP4Q96S96 227 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 CDCA3Q99618 268 aaPredicted RBP17.26■□□□□ 0.35
SHOX-201ENST00000334060 SFXN1Q9H9B4 322 aa17.26■□□□□ 0.35
SHOX-201ENST00000334060 CYLDQ9NQC7 956 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms