RNA–Protein interactions for RNA: ENST00000331471.8

BEST3-203, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,506 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-203ENST00000331471 KBTBD4Q9NVX7 518 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 UBE4BO95155 1302 aa9.4□□□□□ -0.91
BEST3-203ENST00000331471 F5P12259 2224 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 USP27XA6NNY8 438 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 F8VP50 259 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 LEFTY2O00292 366 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 ARHGAP6O43182 974 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 DXOO77932 396 aaKnown RBP9.39□□□□□ -0.91
BEST3-203ENST00000331471 RHOBTB1O94844 696 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 SLFN14P0C7P3 912 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 ZNF806P0C7X5 589 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 TCF3P15923 654 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 PFKLP17858 780 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 BMP6P22004 513 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 HOXD13P35453 343 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 RAP1GAPP47736 663 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 PPP3CCP48454 512 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 DGKEP52429 567 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 TBX2Q13207 712 aaPredicted RBP9.39□□□□□ -0.91
BEST3-203ENST00000331471 PSMD6Q15008 389 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 TDRD10Q5VZ19 366 aaKnown RBP9.39□□□□□ -0.91
BEST3-203ENST00000331471 LIMS2Q7Z4I7 341 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 XXYLT1Q8NBI6 393 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 TSTD1Q8NFU3 115 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 ZNF507Q8TCN5 953 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 ZC3H10Q96K80 434 aaKnown RBP9.39□□□□□ -0.91
BEST3-203ENST00000331471 PPP1R13BQ96KQ4 1090 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 GSDMAQ96QA5 445 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 ELOVL4Q9GZR5 314 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 LINC00597Q9H2U6 94 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 VPS45Q9NRW7 570 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 PCDHGA5Q9Y5G8 931 aa9.39□□□□□ -0.91
BEST3-203ENST00000331471 HELZP42694 1942 aaKnown RBP9.39□□□□□ -0.91
BEST3-203ENST00000331471 ZNF840PA6NDX5 716 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 A8MXQ7 604 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 POLR2DO15514 142 aaKnown RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 TGFB1I1O43294 461 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 ZSCAN12O43309 604 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 PHACTR2O75167 634 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 TACC1O75410 805 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 CST3P01034 146 aaPredicted RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 ATP1A3P13637 1013 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 GBP1P32455 592 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 MPLP40238 635 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 LIMK1P53667 647 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 NOP14P78316 857 aaKnown RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 CREB5Q02930 508 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 CYP24A1Q07973 514 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 WDR72Q3MJ13 1102 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 PLK5Q496M5 336 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 GPR179Q6PRD1 2367 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 UNC13DQ70J99 1090 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 EPM2AIP1Q7L775 607 aaPredicted RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 TTC30AQ86WT1 665 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 SCFD1Q8WVM8 642 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 EZH1Q92800 747 aaPredicted RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 C8orf48Q96LL4 319 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 SLITRK1Q96PX8 696 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 C7orf25Q9BPX7 421 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 SRRTQ9BXP5 876 aaKnown RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 BLZF1Q9H2G9 400 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 DPEP3Q9H4B8 488 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 SMOC1Q9H4F8 434 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 MAGEF1Q9HAY2 307 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 SMPD4Q9NXE4 827 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 NXF1Q9UBU9 619 aaKnown RBP9.38□□□□□ -0.91
BEST3-203ENST00000331471 SERTAD1Q9UHV2 236 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 CPQQ9Y646 472 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 RALGAPA1Q6GYQ0 2036 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 GREB1Q4ZG55 1949 aa9.38□□□□□ -0.91
BEST3-203ENST00000331471 ATP8B3O60423 1300 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 SLC9A3R1O14745 358 aaPredicted RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 DCLK1O15075 740 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 STX10O60499 249 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 EXOC3O60645 756 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 SLU7O95391 586 aaKnown RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 MBL2P11226 248 aaPredicted RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 PTPN1P18031 435 aaKnown RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 ATICP31939 592 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 MMP16P51512 607 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 ETF1P62495 437 aaKnown RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 SLC7A9P82251 487 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 TAF10Q12962 218 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 BIRC3Q13489 604 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 USP39Q53GS9 565 aaKnown RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 C2orf27AQ580R0 203 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 PLA2G2CQ5R387 149 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 STPG1Q5TH74 334 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 RNF43Q68DV7 783 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 C11orf74Q86VG3 221 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 DDX42Q86XP3 938 aaKnown RBP eCLIP9.37□□□□□ -0.91
BEST3-203ENST00000331471 NUP93Q8N1F7 819 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 MED10Q9BTT4 135 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 TTLL2Q9BWV7 592 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 TPSD1Q9BZJ3 242 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 ZNF518BQ9C0D4 1074 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 DUSP15Q9H1R2 295 aaPredicted RBP9.37□□□□□ -0.91
BEST3-203ENST00000331471 ALG2Q9H553 416 aa9.37□□□□□ -0.91
BEST3-203ENST00000331471 SLC39A2Q9NP94 309 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms