RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 KLF6Q99612 283 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 PITPNM3Q9BZ71 974 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 PPCSQ9HAB8 311 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 KBTBD13C9JR72 458 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 GOLGA8RI6L899 631 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 SMAPO00193 183 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 MYL3P08590 195 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ZNF865P0CJ78 1059 aaPredicted RBP15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 TGM2P21980 687 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 BCAT1P54687 386 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 SPARCL1Q14515 664 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 RASA2Q15283 850 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 KLHL38Q2WGJ6 581 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 MORN1Q5T089 497 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 UBXN11Q5T124 520 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ADGRD1Q6QNK2 874 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 C2orf69Q8N8R5 385 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ARRDC4Q8NCT1 418 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 DCAKDQ8WVC6 231 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 RMDN2Q96LZ7 410 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 DHRS4Q9BTZ2 278 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 SNX25Q9H3E2 840 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 DHX35Q9H5Z1 703 aaKnown RBP15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 SLCO1B3Q9NPD5 702 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 ARL2BPQ9Y2Y0 163 aa15.46■□□□□ 0.07
CLCNKA-201ENST00000331433 CD4P01730 458 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 DESP17661 470 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 CYP2F1P24903 491 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 TKTP29401 623 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 MSH2P43246 934 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 YWHAGP61981 247 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 GBE1Q04446 702 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 MAP2K5Q13163 448 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 SLC26A9Q7LBE3 791 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 ZDHHC17Q8IUH5 632 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 CRYBG2Q8N1P7 616 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 CCDC110Q8TBZ0 833 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 NDRG1Q92597 394 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 ZNF670Q9BS34 389 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 C12orf65Q9H3J6 166 aaKnown RBP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 NRDE2Q9H7Z3 1164 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 PAK5Q9P286 719 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 PRKAG3Q9UGI9 489 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 TCRBV9S1A1TA0A576 114 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 CHADO15335 359 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 DNAJC8O75937 253 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 L1CAMP32004 1257 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 SNX16P57768 344 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 MGAT5Q09328 741 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 PCBP1Q15365 356 aaKnown RBP eCLIP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 FUKQ8N0W3 1084 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 CCDC185Q8N715 623 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 APPL2Q8NEU8 664 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 MZB1Q8WU39 189 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 USP6NLQ92738 828 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 ZNF560Q96MR9 790 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 C11orf84Q9BUA3 381 aaPredicted RBP15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 KLC4Q9NSK0 619 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 FETUBQ9UGM5 382 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 IPPQ9Y573 584 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 TEX264Q9Y6I9 313 aa15.45■□□□□ 0.06
CLCNKA-201ENST00000331433 AXLP30530 894 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 PTPN9P43378 593 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 TAF6P49848 677 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 SLC18A1P54219 525 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 FKBP1BP68106 108 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 SLC10A2Q12908 348 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 XRCC4Q13426 336 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 KBTBD12Q3ZCT8 623 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 RTP4Q96DX8 246 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 MTMR10Q9NXD2 777 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 GDAP2Q9NXN4 497 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 AP4E1Q9UPM8 1137 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 APRTP07741 180 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 ATP2A2P16615 1042 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 IGFBP6P24592 240 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 YWHAZP63104 245 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 DPYSL2Q16555 572 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 HHATQ5VTY9 493 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 LVRNQ6Q4G3 990 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 OSTM1Q86WC4 334 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 ADGRF2Q8IZF7 708 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 FITM2Q8N6M3 262 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 CCDC63Q8NA47 563 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 SMG8Q8ND04 991 aaKnown RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 CENPIQ92674 756 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 CFAP36Q96G28 342 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 KCTD15Q96SI1 283 aaPredicted RBP15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 CYTH2Q99418 400 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
CLCNKA-201ENST00000331433 BCLAF3A2AJT9 711 aaKnown RBP15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 DCAF8L1A6NGE4 600 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 HAS3O00219 553 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 GSTA1P08263 222 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 KCNE1P15382 129 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 CYP2B6P20813 491 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 PDK4Q16654 411 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 CYB5D1Q6P9G0 228 aa15.43■□□□□ 0.06
CLCNKA-201ENST00000331433 PYROXD2Q8N2H3 581 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms