RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TEAD2Q15562 447 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 CNGA2Q16280 664 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 IER5LQ5T953 404 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 PAQR9Q6ZVX9 377 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 TMEM150AQ86TG1 271 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 ZNF653Q96CK0 615 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 ASIC4Q96FT7 647 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 LRFN3Q9BTN0 628 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 NT5C1AQ9BXI3 368 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 B3GNT5Q9BYG0 378 aa17.28■□□□□ 0.36
PDLIM1-201ENST00000329399 A8MXQ7 604 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 TADA3O75528 432 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 PDGFBP01127 241 aaPredicted RBP17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 SLC1A1P43005 524 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 RAD23BP54727 409 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 SMARCB1Q12824 385 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 NFE2Q16621 373 aaPredicted RBP17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 CFAP221Q4G0U5 840 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 TANGO2Q6ICL3 276 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 TRIM67Q6ZTA4 783 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 ELMOD1Q8N336 334 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 MYCBPAPQ8TBZ2 947 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 WHAMMQ8TF30 809 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 C2orf15Q8WU43 125 aaKnown RBP17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 CYFIP2Q96F07 1278 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 KXD1Q9BQD3 176 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 ASAH2Q9NR71 780 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 ADAM22Q9P0K1 906 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 WDR35Q9P2L0 1181 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 SORCS3Q9UPU3 1222 aa17.27■□□□□ 0.36
PDLIM1-201ENST00000329399 GPR37L1O60883 481 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 FCARP24071 287 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 NDST1P52848 882 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 FAM78AQ5JUQ0 283 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 CYP4A22Q5TCH4 519 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 HFE2Q6ZVN8 426 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 MON1BQ7L1V2 547 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 ACOT1Q86TX2 421 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 NT5DC3Q86UY8 548 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 SPATA2LQ8IUW3 424 aaPredicted RBP17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 SCN4BQ8IWT1 228 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 C12orf29Q8N999 325 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 B3GALNT2Q8NCR0 500 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 HES6Q96HZ4 224 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 ACP6Q9NPH0 428 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 PARVAQ9NVD7 372 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 CNOT8Q9UFF9 292 aaKnown RBP17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 RAPGEFL1Q9UHV5 662 aa17.26■□□□□ 0.35
PDLIM1-201ENST00000329399 BUB1BO60566 1050 aaPredicted RBP17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 MMP8P22894 467 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 GSCP56915 257 aaPredicted RBP17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 CYP4F8P98187 520 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 PLD1Q13393 1074 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 TDGQ13569 410 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 SGO2Q562F6 1265 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 CCDC181Q5TID7 509 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 NAA35Q5VZE5 725 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 CCDC70Q6NSX1 233 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 RSRC2Q7L4I2 434 aaKnown RBP17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 GPR161Q8N6U8 529 aaKnown RBP17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 UBL4BQ8N7F7 174 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 SLC4A11Q8NBS3 891 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 ZNF564Q8TBZ8 553 aaPredicted RBP17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 ARHGEF26Q96DR7 871 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 RSPRY1Q96DX4 576 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 NAP1L3Q99457 506 aaPredicted RBP17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 NUP85Q9BW27 656 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 IGSF9Q9P2J2 1179 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 ASB3Q9Y575 518 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 DMDP11532 3685 aa17.25■□□□□ 0.35
PDLIM1-201ENST00000329399 F11P03951 625 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 SETSIPP0DME0 302 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 CD19P15391 556 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 GABRR2P28476 465 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 VIPR2P41587 438 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 USP46P62068 366 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 PLEKHA7Q6IQ23 1121 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 CREG2Q8IUH2 290 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 LRRC3BQ96PB8 259 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 ELOVL4Q9GZR5 314 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 OSGEPQ9NPF4 335 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 GDE1Q9NZC3 331 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 TTC7AQ9ULT0 858 aaPredicted RBP17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 MAGED2Q9UNF1 606 aaPredicted RBP17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 CCDC66A2RUB6 948 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 TMEM221A6NGB7 291 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 SLC38A8A6NNN8 435 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 M0R296 226 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 MYO1FO00160 1098 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 ZNF197O14709 1029 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 MICAL2O94851 1124 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 CCDC130P13994 396 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 MCM3P25205 808 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 MAGEA11P43364 429 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 TMEM31Q5JXX7 168 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 LCLAT1Q6UWP7 414 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 ERICH1Q86X53 443 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 CRYBG2Q8N1P7 616 aa17.24■□□□□ 0.35
PDLIM1-201ENST00000329399 ACTRT1Q8TDG2 376 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms