RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 ACADSBP45954 432 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 CLCNKBP51801 687 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 ADIGQ0VDE8 80 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 MSS51Q4VC12 460 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 FNBP1LQ5T0N5 605 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 LIMS2Q7Z4I7 341 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 TAX1BP1Q86VP1 789 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 PQLC3Q8N755 202 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 NAT8LQ8N9F0 302 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 RNF169Q8NCN4 708 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 TEKT4Q8WW24 435 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 ATXN2LQ8WWM7 1075 aaKnown RBP7.89□□□□□ -1.15
IFT88-201ENST00000319980 CHMP6Q96FZ7 201 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 HSFY1Q96LI6 401 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 TTC25Q96NG3 672 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 AGO3Q9H9G7 860 aaKnown RBP7.89□□□□□ -1.15
IFT88-201ENST00000319980 MLXIPLQ9NP71 852 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 MIOSQ9NXC5 875 aa7.89□□□□□ -1.15
IFT88-201ENST00000319980 XPO7Q9UIA9 1087 aaKnown RBP7.89□□□□□ -1.15
IFT88-201ENST00000319980 TRIP12Q14669 1992 aaPredicted RBP7.89□□□□□ -1.15
IFT88-201ENST00000319980 NDC80O14777 642 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 MDM4O15151 490 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 KCNN4O15554 427 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PIAS1O75925 651 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 TMEM63AO94886 807 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 ASGR1P07306 291 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 ABHD2P08910 425 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 WARSP23381 471 aaKnown RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 THPOP40225 353 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PTPN9P43378 593 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 NDUFV1P49821 464 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 HTRA3P83110 453 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PRKCZQ05513 592 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 SF3A3Q12874 501 aaKnown RBP eCLIP7.88□□□□□ -1.158e-10■■■■■ 61.5
IFT88-201ENST00000319980 TMED2Q15363 201 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 DCAF6Q58WW2 860 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 ANKRD42Q8N9B4 389 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PYROXD1Q8WU10 500 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 DYDC1Q8WWB3 177 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 SENP8Q96LD8 212 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 HNRNPABQ99729 332 aaKnown RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 DUSP16Q9BY84 665 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 XPNPEP3Q9NQH7 507 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 SLC38A7Q9NVC3 462 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 DDX43Q9NXZ2 648 aaKnown RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 SYNJ2BP-COX16A0A087WUM0 186 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 ARL5CA6NH57 179 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 RASA4BC9J798 803 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 XPO1O14980 1071 aaKnown RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 SEPT4O43236 478 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 RASA4O43374 803 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 NPR3P17342 541 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 RBL1P28749 1068 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 SSTR1P30872 391 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 SCNN1GP51170 649 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 RABGGTBP53611 331 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 ARL4CP56559 192 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 MAP3K7CLP57077 242 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 CACNB2Q08289 660 aaPredicted RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 BBS9Q3SYG4 887 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 MDH1BQ5I0G3 518 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 EFHC1Q5JVL4 640 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 KIAA0319Q5VV43 1072 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 VSTM1Q6UX27 236 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 C3orf62Q6ZUJ4 267 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PAQR9Q6ZVX9 377 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 SERINC5Q86VE9 423 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 FAM131BQ86XD5 332 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 C10orf67Q8IYJ2 551 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 HACE1Q8IYU2 909 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 DEFB106AQ8N104 65 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PDIK1LQ8N165 341 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 CCDC33Q8N5R6 958 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 NCAPGQ9BPX3 1015 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 PAAF1Q9BRP4 392 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 ZNF670Q9BS34 389 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 MED10Q9BTT4 135 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 C11orf84Q9BUA3 381 aaPredicted RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 SENP6Q9GZR1 1112 aaPredicted RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 USP29Q9HBJ7 922 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 LRRC4Q9HBW1 653 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP7.88□□□□□ -1.15
IFT88-201ENST00000319980 COX16Q9P0S2 106 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 DDX20Q9UHI6 824 aaKnown RBP7.88□□□□□ -1.15
IFT88-201ENST00000319980 AP4E1Q9UPM8 1137 aa7.88□□□□□ -1.15
IFT88-201ENST00000319980 CASTOR2A6NHX0 329 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 GABRDO14764 452 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 GPR182O15218 404 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 VIMP08670 466 aaKnown RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 GHRP10912 638 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CYP2F1P24903 491 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 CD52P31358 61 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 L1CAMP32004 1257 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 MATKP42679 507 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 TM4SF4P48230 202 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 RPL34P49207 117 aaKnown RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 YWHAZP63104 245 aaKnown RBP7.87□□□□□ -1.15
IFT88-201ENST00000319980 MPP2Q14168 576 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 KCNA10Q16322 511 aa7.87□□□□□ -1.15
IFT88-201ENST00000319980 SLC9A4Q6AI14 798 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms