RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GLP2RO95838 553 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 FYNP06241 537 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CSH1P0DML2 217 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CSH2P0DML3 217 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 TCF4P15884 667 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CYP4F8P98187 520 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CLUL1Q15846 466 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 EFHC1Q5JVL4 640 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 BTBD8Q5XKL5 378 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 SLC26A9Q7LBE3 791 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 ELMOD1Q8N336 334 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 SLC35F6Q8N357 371 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CCSER2Q9H7U1 834 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 POPDC2Q9HBU9 364 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 CYLDQ9NQC7 956 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 UVRAGQ9P2Y5 699 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 SFMBT1Q9UHJ3 866 aa16.12■□□□□ 0.17
PDLIM5-202ENST00000318007 A0A1W2PRU2 124 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 MSI1O43347 362 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 KIF5CO60282 957 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 HSF2BPO75031 334 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 ZMYND10O75800 440 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 GABRR2P28476 465 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 SULT1E1P49888 294 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 RARS2Q5T160 578 aaKnown RBP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 STXBP5Q5T5C0 1151 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 PM20D1Q6GTS8 502 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 GRASPQ7Z6J2 395 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 MIB1Q86YT6 1006 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 ZDHHC17Q8IUH5 632 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 ST13P5Q8NFI4 369 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 PPP2R3CQ969Q6 453 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 ACSF2Q96CM8 615 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 WDR24Q96S15 920 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 PIDD1Q9HB75 910 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 SCML2Q9UQR0 700 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 MTCH2Q9Y6C9 303 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 C2orf78A6NCI8 922 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 C2CD4BA6NLJ0 364 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 TADA3O75528 432 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 GPD1P21695 349 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 SDC4P31431 198 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 DLX2Q07687 328 aaPredicted RBP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 CCDC14Q49A88 953 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 MYLIPQ8WY64 445 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 TBCBQ99426 244 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 PLEKHA4Q9H4M7 779 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 KLHL11Q9NVR0 708 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 CLDND1Q9NY35 253 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 HSFX1Q9UBD0 423 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 PCSK1NQ9UHG2 260 aa16.11■□□□□ 0.17
PDLIM5-202ENST00000318007 A0A0A6YYK5 440 aaPredicted RBP16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 SCAMP3O14828 347 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 SPOPO43791 374 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 COMTP21964 271 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 CCR2P41597 374 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 EFEMP1Q12805 493 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 SMTNL2Q2TAL5 461 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 SCYL2Q6P3W7 929 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 SYT10Q6XYQ8 523 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 ITIH5Q86UX2 942 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 FAM172AQ8WUF8 416 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 ING5Q8WYH8 240 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 TCEAL4Q96EI5 215 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 ALS2CR12Q96Q35 445 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 NACA2Q9H009 215 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 ATXN3LQ9H3M9 355 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 ASAH2Q9NR71 780 aa16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 TLR8Q9NR97 1041 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 DNMT3BQ9UBC3 853 aaKnown RBP16.1■□□□□ 0.17
PDLIM5-202ENST00000318007 MTCL1Q9Y4B5 1905 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 GOLGA6L9A6NEM1 432 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 M0QYT0 321 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 HMBSP08397 361 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 RARGP13631 454 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 GSCP56915 257 aaPredicted RBP16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 LLGL1Q15334 1064 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 C10orf120Q5SQS8 335 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 ZFYVE27Q5T4F4 411 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 TXNDC8Q6A555 127 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 GAREM2Q75VX8 874 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 MON1AQ86VX9 555 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 CYP2S1Q96SQ9 504 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 FAM204AQ9H8W3 233 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 TMPRSS4Q9NRS4 437 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 DNAI1Q9UI46 699 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 ALG6Q9Y672 507 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 BTNL10A8MVZ5 291 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 FANCGO15287 622 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 DAB1O75553 588 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 MATKP42679 507 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 SLC5A9Q2M3M2 681 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 KCNT1Q5JUK3 1230 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 TMEM150AQ86TG1 271 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 FAM131BQ86XD5 332 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 RNF139Q8WU17 664 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 SMG7Q92540 1137 aaKnown RBP16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 CASP10Q92851 521 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 GAS2L1Q99501 681 aaPredicted RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms