RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 PADI3Q9ULW8 664 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 R3HDM2Q9Y2K5 976 aaKnown RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 SLC4A7Q9Y6M7 1214 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 CEP290O15078 2479 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 CCNB1P14635 433 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ATF7P17544 494 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 PCK1P35558 622 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 KCNJ1P48048 391 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 TUBP50607 506 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DR1Q01658 176 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DSC3Q14574 896 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 LPIN1Q14693 890 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 CLUL1Q15846 466 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 LHX8Q68G74 356 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 DUPD1Q68J44 220 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 LCA5Q86VQ0 697 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 JAMLQ86YT9 394 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 LRRC34Q8IZ02 419 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ARHGAP18Q8N392 663 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 OR6B3Q8NGW1 331 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 FBF1Q8TES7 1133 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 C1orf54Q8WWF1 131 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 NCSTNQ92542 709 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ACSF2Q96CM8 615 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 TSPAN18Q96SJ8 248 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 GAD1Q99259 594 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 MMADHCQ9H3L0 296 aaPredicted RBP13.62□□□□□ -0.23
CPNE1-201ENST00000317677 CHST7Q9NS84 486 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 ABCF3Q9NUQ8 709 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 PCYOX1Q9UHG3 505 aa13.62□□□□□ -0.23
CPNE1-201ENST00000317677 E5RJQ4 531 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 RALAP11233 206 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 KRT3P12035 628 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 CHRNA3P32297 505 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 FLT3P36888 993 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 COILP38432 576 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-201ENST00000317677 RGS7P49802 495 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 TAF6P49848 677 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 LILRA4P59901 499 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 TAP1Q03518 808 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 PMF1Q6P1K2 205 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 TMEM154Q6P9G4 183 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 TRAF7Q6Q0C0 670 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 FAM183BPQ6ZVS7 135 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 CROCCP2Q86T23 111 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 HOOK3Q86VS8 718 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 UNC93AQ86WB7 457 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.61□□□□□ -0.234e-6■■■□□ 17.2
CPNE1-201ENST00000317677 PCSK9Q8NBP7 692 aaKnown RBP13.61□□□□□ -0.23
CPNE1-201ENST00000317677 ATG4AQ8WYN0 398 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 FAM136AQ96C01 138 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 ZNF560Q96MR9 790 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 ELAC2Q9BQ52 826 aaKnown RBP13.61□□□□□ -0.23
CPNE1-201ENST00000317677 HTATIP2Q9BUP3 242 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 HEMGNQ9BXL5 484 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 DPH5Q9H2P9 285 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 CHST12Q9NRB3 414 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 RPL26L1Q9UNX3 145 aaKnown RBP13.61□□□□□ -0.23
CPNE1-201ENST00000317677 USP15Q9Y4E8 981 aaPredicted RBP13.61□□□□□ -0.23
CPNE1-201ENST00000317677 TSC2P49815 1807 aa13.61□□□□□ -0.23
CPNE1-201ENST00000317677 A8MXQ7 604 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 DCDC2CA8MYV0 355 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 LRCH4O75427 683 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 PDGFRBP09619 1106 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 CCDC130P13994 396 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 CHN1P15882 459 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 IL1R2P27930 398 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SH3BGRP55822 239 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SLC25A11Q02978 314 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 DHX34Q14147 1143 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 HLTFQ14527 1009 aaKnown RBP eCLIP13.6□□□□□ -0.235e-8■■□□□ 14.3
CPNE1-201ENST00000317677 TSNAXIP1Q2TAA8 658 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 KRT71Q3SY84 523 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 RAB6CQ53S08 254 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 ARHGAP17Q68EM7 881 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 CCDC137Q6PK04 289 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 MRPL10Q7Z7H8 261 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 MYLK4Q86YV6 388 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 CRYBG2Q8N1P7 616 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 C3orf58Q8NDZ4 430 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 EXD1Q8NHP7 514 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SLC35F5Q8WV83 523 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 KHSRPQ92945 711 aaKnown RBP eCLIP13.6□□□□□ -0.233e-9■□□□□ 10
CPNE1-201ENST00000317677 RNF25Q96BH1 459 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 TRIM31Q9BZY9 425 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 UBE2OQ9C0C9 1292 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 RAB6CQ9H0N0 254 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 LRRC19Q9H756 370 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 TDRD15B5MCY1 1934 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 FAM187AA6NFU0 413 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 MAP3K13O43283 966 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 XPOTO43592 962 aaKnown RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 PSMA2P25787 234 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 PTK7Q13308 1070 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 PIGHQ14442 188 aaPredicted RBP13.6□□□□□ -0.23
CPNE1-201ENST00000317677 PPP2R5EQ16537 467 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 SV2CQ496J9 727 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 FAM26DQ5JW98 314 aa13.6□□□□□ -0.23
CPNE1-201ENST00000317677 MFSD7Q6UXD7 560 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms