RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 FAM192AQ9GZU8 254 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 MYOZ2Q9NPC6 264 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.84■□□□□ 0.77
RTN4-201ENST00000317610 SLC7A8Q9UHI5 535 aa19.84■□□□□ 0.77
RTN4-201ENST00000317610 APOEP02649 317 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 PROZP22891 400 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 WASHC5Q12768 1159 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 SYCP2LQ5T4T6 812 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 TMCO4Q5TGY1 634 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 ILDR2Q71H61 639 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 NUDCD3Q8IVD9 361 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 ANKRD36BP1Q96IX9 119 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 NXF1Q9UBU9 619 aaKnown RBP19.83■□□□□ 0.76
RTN4-201ENST00000317610 SORCS3Q9UPU3 1222 aa19.83■□□□□ 0.76
RTN4-201ENST00000317610 BPGMP07738 259 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 CRABP2P29373 138 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 CRHR1P34998 444 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 AQP5P55064 265 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 AP2B1P63010 937 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 RBBP5Q15291 538 aaKnown RBP19.82■□□□□ 0.76
RTN4-201ENST00000317610 STXBP2Q15833 593 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 AP1ARQ63HQ0 302 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 MCUQ8NE86 351 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 CNPY3Q9BT09 278 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 ZNF395Q9H8N7 513 aaPredicted RBP19.82■□□□□ 0.76
RTN4-201ENST00000317610 DCAF8L1A6NGE4 600 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 CYB561D2O14569 222 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 KRT38O76015 456 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 MICAL2O94851 1124 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 PRKCBP05771 671 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 MAGEA3P43357 314 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 PTPN11Q06124 597 aaPredicted RBP19.82■□□□□ 0.76
RTN4-201ENST00000317610 TNFAIP1Q13829 316 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 DBN1Q16643 649 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 ARCQ7LC44 396 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 ADGRG6Q86SQ4 1221 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 PLD5Q8N7P1 536 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 C12orf42Q96LP6 360 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 ADPGKQ9BRR6 497 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 SIKE1Q9BRV8 207 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 CCDC28BQ9BUN5 200 aa19.82■□□□□ 0.76
RTN4-201ENST00000317610 BCLAF3A2AJT9 711 aaKnown RBP19.81■□□□□ 0.76
RTN4-201ENST00000317610 SLC15A5A6NIM6 579 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 FAM159BA6NKW6 160 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 KCNN4O15554 427 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 CSH1P0DML2 217 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 CSH2P0DML3 217 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 AOC1P19801 751 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 GPD1P21695 349 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 RFX8Q6ZV50 586 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 CEP120Q8N960 986 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 TWNKQ96RR1 684 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 ECSITQ9BQ95 431 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 THTPAQ9BU02 230 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 C20orf27Q9GZN8 174 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 KLC2Q9H0B6 622 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 VPS33BQ9H267 617 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 PTPRHQ9HD43 1115 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 ETNK2Q9NVF9 386 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 NDE1Q9NXR1 346 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 HMX2A2RU54 273 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 ANKRD33BA6NCL7 494 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 SDR42E2A6NKP2 422 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 C2CD4BA6NLJ0 364 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 UGT1A9O60656 530 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 TGM2P21980 687 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 GPD2P43304 727 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 RAB27AP51159 221 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 DSG1Q02413 1049 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 KDSRQ06136 332 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 BMPR2Q13873 1038 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 ZNF667Q5HYK9 610 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 FAM102AQ5T9C2 384 aaPredicted RBP19.81■□□□□ 0.76
RTN4-201ENST00000317610 IER5Q5VY09 327 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 TRNP1Q6NT89 227 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 C1orf228Q6PIY5 440 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 MTHFD1LQ6UB35 978 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 UNC5AQ6ZN44 842 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 TIFABQ6ZNK6 161 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 CLPTM1LQ96KA5 538 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 SLC13A1Q9BZW2 595 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 ELOVL4Q9GZR5 314 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 ASCC2Q9H1I8 757 aaPredicted RBP19.81■□□□□ 0.76
RTN4-201ENST00000317610 UGT1A7Q9HAW7 530 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 UGT1A10Q9HAW8 530 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 UGT1A8Q9HAW9 530 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 SIX4Q9UIU6 781 aa19.81■□□□□ 0.76
RTN4-201ENST00000317610 CCDC195A0A1B0GUA6 201 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 PRR5-ARHGAP8B1AHC4 643 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 FKBP6O75344 327 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 APBA3O96018 575 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 LYNP07948 512 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 CPOXP36551 454 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 CDH8P55286 799 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 ARHGAP8P85298 464 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 MDH1BQ5I0G3 518 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 SH3PXD2AQ5TCZ1 1133 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 MPZL3Q6UWV2 235 aa19.8■□□□□ 0.76
RTN4-201ENST00000317610 PPP1R12CQ9BZL4 782 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms