RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 SLC9A4Q6AI14 798 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 MFSD5Q6N075 450 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 STRADAQ7RTN6 431 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 PCGF5Q86SE9 256 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 VSIG1Q86XK7 387 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 CCDC185Q8N715 623 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 FAF2Q96CS3 445 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 ZNF670Q9BS34 389 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 DHX35Q9H5Z1 703 aaKnown RBP19.13■□□□□ 0.65
CCDC43-201ENST00000315286 INPP5FQ9Y2H2 1132 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 HEY1Q9Y5J3 304 aa19.13■□□□□ 0.65
CCDC43-201ENST00000315286 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.13■□□□□ 0.65
CCDC43-201ENST00000315286 GOLGA8MH3BSY2 632 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 B3GAT3O94766 335 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 BCAR1P56945 870 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 YWHAZP63104 245 aaKnown RBP19.12■□□□□ 0.65
CCDC43-201ENST00000315286 FASTKD3Q14CZ7 662 aaKnown RBP19.12■□□□□ 0.65
CCDC43-201ENST00000315286 SLC25A52Q3SY17 297 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 HP1BP3Q5SSJ5 553 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-201ENST00000315286 ANKRD22Q5VYY1 191 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 REM2Q8IYK8 340 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-201ENST00000315286 RAET1EQ8TD07 263 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 BCAS4Q8TDM0 211 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 PGBD4Q96DM1 585 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 KCNK16Q96T55 309 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 SMOQ99835 787 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 MTMR10Q9NXD2 777 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 CDH9Q9ULB4 789 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 AP4E1Q9UPM8 1137 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 H7C0C1 242 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 NDC80O14777 642 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 AP1G2O75843 785 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 IVLP07476 585 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 TGM2P21980 687 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 STIP1P31948 543 aaKnown RBP19.12■□□□□ 0.65
CCDC43-201ENST00000315286 ATP5OP48047 213 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 SULT1E1P49888 294 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 TKTL1P51854 596 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 PITX1P78337 314 aaPredicted RBP19.12■□□□□ 0.65
CCDC43-201ENST00000315286 GAD2Q05329 585 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 DCAF6Q58WW2 860 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 FAM182AQ5T1J6 154 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 CD300LGQ6UXG3 332 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 FAM35AQ86V20 835 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 PPIL6Q8IXY8 311 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 SIX6OS1Q8N1H7 587 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 NAT8LQ8N9F0 302 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 MDM1Q8TC05 714 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 GLT1D1Q96MS3 346 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 SERPINB12Q96P63 405 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 RTP3Q9BQQ7 232 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 TRPV6Q9H1D0 765 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 TMEM30AQ9NV96 361 aa19.12■□□□□ 0.65
CCDC43-201ENST00000315286 DAB1O75553 588 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 MAP3K6O95382 1288 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 CYP2F1P24903 491 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 BRCC3P46736 316 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 CACNA2D1P54289 1103 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 ECHDC2Q86YB7 292 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 ZMIZ2Q8NF64 920 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 MYCBPAPQ8TBZ2 947 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 HASPINQ8TF76 798 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 KCTD15Q96SI1 283 aaPredicted RBP19.11■□□□□ 0.65
CCDC43-201ENST00000315286 NRDE2Q9H7Z3 1164 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 USP29Q9HBJ7 922 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 CREBZFQ9NS37 354 aa19.11■□□□□ 0.65
CCDC43-201ENST00000315286 TCRBV7S3A2A0A539 114 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 ZNF487B1APH4 448 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 NRP1O14786 923 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 ALOX15BO15296 676 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 TCEA3O75764 348 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 TOMM70O94826 608 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 CKBP12277 381 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 GRIK3Q13003 919 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 CCDC38Q502W7 563 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 OTUD1Q5VV17 481 aaPredicted RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 HFE2Q6ZVN8 426 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 ZNF598Q86UK7 904 aaKnown RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 FAM131BQ86XD5 332 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 CFHR5Q9BXR6 569 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 ZMYND15Q9H091 742 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 STMN4Q9H169 189 aaPredicted RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 CTNNAL1Q9UBT7 734 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 ODC1P11926 461 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 NOS2P35228 1153 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 MMP13P45452 471 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 PDIA2Q13087 525 aaKnown RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 TUSC3Q13454 348 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 SYPL2Q5VXT5 272 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 CENPUQ71F23 418 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 GPRIN1Q7Z2K8 1008 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 RTN4RL1Q86UN2 441 aaPredicted RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 PYROXD2Q8N2H3 581 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 NT5C3BQ969T7 300 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 NPY6RQ99463 290 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 ULBP1Q9BZM6 244 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 EPN3Q9H201 632 aa19.1■□□□□ 0.65
CCDC43-201ENST00000315286 CNOT10Q9H9A5 744 aaKnown RBP19.1■□□□□ 0.65
CCDC43-201ENST00000315286 UBN1Q9NPG3 1134 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms