RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 NR2E1Q9Y466 385 aa23.52■■□□□ 1.36
IRF3-201ENST00000309877 TCRBV7S2A1N4TA0A589 114 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 M0QYT0 321 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 SOAT2O75908 522 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 DNAJB2P25686 324 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 GLE1Q53GS7 698 aaKnown RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 CMASQ8NFW8 434 aaPredicted RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 SLC7A14Q8TBB6 771 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 SP7Q8TDD2 431 aaPredicted RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 TEKT4Q8WW24 435 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 EDEM1Q92611 657 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 LRRC1Q9BTT6 524 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 CRISPLD1Q9H336 500 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 STAU2Q9NUL3 570 aaKnown RBP eCLIP23.51■■□□□ 1.35
IRF3-201ENST00000309877 AFF4Q9UHB7 1163 aaKnown RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 KDELR1P24390 212 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 RDXP35241 583 aaKnown RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 TUFMP49411 452 aaKnown RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 YWHAGP61981 247 aaKnown RBP eCLIP23.51■■□□□ 1.35
IRF3-201ENST00000309877 DEUP1Q05D60 604 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 TFDP3Q5H9I0 405 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 BTBD8Q5XKL5 378 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 KAZNQ674X7 775 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 SPATA17Q96L03 361 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 ADAM33Q9BZ11 813 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 DDX47Q9H0S4 455 aaKnown RBP23.51■■□□□ 1.35
IRF3-201ENST00000309877 ANKZF1Q9H8Y5 726 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 SCML2Q9UQR0 700 aa23.51■■□□□ 1.35
IRF3-201ENST00000309877 SYNJ2BP-COX16A0A087WUM0 186 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 ENDOD1O94919 500 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 RTN3O95197 1032 aaPredicted RBP23.5■■□□□ 1.35
IRF3-201ENST00000309877 LINC00271P0C7V0 271 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 PTPN7P35236 360 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 ATXN1P54253 815 aaKnown RBP23.5■■□□□ 1.35
IRF3-201ENST00000309877 NME3Q13232 169 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 ERMARDQ5T6L9 678 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 TPGS2Q68CL5 300 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 DENND5BQ6ZUT9 1274 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 CYP4V2Q6ZWL3 525 aaPredicted RBP23.5■■□□□ 1.35
IRF3-201ENST00000309877 STKLD1Q8NE28 680 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 ZNF461Q8TAF7 563 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 GPR152Q8TDT2 470 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 AUTS2Q8WXX7 1259 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 ABHD8Q96I13 439 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP23.5■■□□□ 1.35
IRF3-201ENST00000309877 ABCC13Q9NSE7 274 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 COX16Q9P0S2 106 aa23.5■■□□□ 1.35
IRF3-201ENST00000309877 TJP3O95049 919 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 KRT10P13645 584 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 CA8P35219 290 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 CDKN2BP42772 138 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 CDH6P55285 790 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 PITX1P78337 314 aaPredicted RBP23.49■■□□□ 1.35
IRF3-201ENST00000309877 CREMQ03060 361 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 KRT81Q14533 505 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 BEND5Q7L4P6 421 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 ANKS1BQ7Z6G8 1248 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 MAP7D3Q8IWC1 876 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 GPR65Q8IYL9 337 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 PRELID2Q8N945 189 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 KLHL23Q8NBE8 558 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 CCDC26Q8TAB7 109 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 MAGOHBQ96A72 148 aaKnown RBP23.49■■□□□ 1.35
IRF3-201ENST00000309877 PARD6BQ9BYG5 372 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 SLITRK6Q9H5Y7 841 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 SSX2IPQ9Y2D8 614 aa23.49■■□□□ 1.35
IRF3-201ENST00000309877 hCG_1818297A0A087WSY0 165 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 TARSL2A2RTX5 802 aaKnown RBP23.48■■□□□ 1.35
IRF3-201ENST00000309877 C3orf70A6NLC5 250 aaPredicted RBP23.48■■□□□ 1.35
IRF3-201ENST00000309877 MDM4O15151 490 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 PHF2O75151 1096 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 YWHAQP27348 245 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 MRPS25P82663 173 aaKnown RBP23.48■■□□□ 1.35
IRF3-201ENST00000309877 SIX1Q15475 284 aaPredicted RBP23.48■■□□□ 1.35
IRF3-201ENST00000309877 OTUD1Q5VV17 481 aaPredicted RBP23.48■■□□□ 1.35
IRF3-201ENST00000309877 MON1AQ86VX9 555 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 FAM131BQ86XD5 332 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 ZDHHC14Q8IZN3 488 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 ARHGAP18Q8N392 663 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 HERPUD2Q9BSE4 406 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 SNRNP25Q9BV90 132 aaKnown RBP23.48■■□□□ 1.35
IRF3-201ENST00000309877 CALN1Q9BXU9 219 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 FAM204AQ9H8W3 233 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 COMMD8Q9NX08 183 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 CALCOCO1Q9P1Z2 691 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 LCHNA4D1U4 455 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 CCDC85CA6NKD9 419 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 ABLIM3O94929 683 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 F9P00740 461 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 CHRNA3P32297 505 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 RAB33AQ14088 237 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 PDK2Q15119 407 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 BNIPLQ7Z465 357 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 MAATS1Q7Z4T9 603 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 ADAM32Q8TC27 787 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 GIPC2Q8TF65 315 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 ZBP1Q9H171 429 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 GPATCH2LQ9NWQ4 482 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 DDIT4Q9NX09 232 aa23.48■■□□□ 1.35
IRF3-201ENST00000309877 IL37Q9NZH6 218 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms