RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 FAM149B1Q96BN6 582 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 CCDC42Q96M95 316 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 PCDHB18PQ96TA0 734 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 TDP1Q9NUW8 608 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 ADAM22Q9P0K1 906 aa18.76■□□□□ 0.59
SSSCA1-201ENST00000309328 DENND4AQ7Z401 1863 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 C2orf16Q68DN1 1984 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 UNC80Q8N2C7 3258 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 YJEFN3A6XGL0 299 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 E7ENQ6 273 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 RTN2O75298 545 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 ERBB2P04626 1255 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 FAM78AQ5JUQ0 283 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 OR6B2Q6IFH4 312 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 OLFML1Q6UWY5 402 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 BHLHA9Q7RTU4 235 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 SCD5Q86SK9 330 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 ARID3BQ8IVW6 561 aaPredicted RBP18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 SLC30A5Q8TAD4 765 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 ARHGAP20Q9P2F6 1191 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 ADAMTS1Q9UHI8 967 aa18.75■□□□□ 0.59
SSSCA1-201ENST00000309328 C2orf78A6NCI8 922 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 DDX3XO00571 662 aaKnown RBP eCLIP18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 CAPN9O14815 690 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 COCHO43405 550 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 AKR1B10O60218 316 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 GABBR2O75899 941 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 COG7P83436 770 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 NNTQ13423 1086 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 HTR4Q13639 388 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 GSE1Q14687 1217 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 SLC18A3Q16572 532 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 C10orf120Q5SQS8 335 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 STXBP5Q5T5C0 1151 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 MSANTD2Q6P1R3 559 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 WDR59Q6PJI9 974 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 MMS22LQ6ZRQ5 1243 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 FAM183BPQ6ZVS7 135 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 MON1BQ7L1V2 547 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 XYLT1Q86Y38 959 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 GPIHBP1Q8IV16 184 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 CCDC170Q8IYT3 715 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 C3orf20Q8ND61 904 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 ZSWIM3Q96MP5 696 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 NMUR1Q9HB89 426 aa18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 THG1LQ9NWX6 298 aaKnown RBP18.74■□□□□ 0.59
SSSCA1-201ENST00000309328 ANKRD62A6NC57 917 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 MBL2P11226 248 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 DESP17661 470 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 EIF4A3P38919 411 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 MTA1Q13330 715 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 FAM102AQ5T9C2 384 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 TMTC1Q8IUR5 882 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 GJD3Q8N144 294 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 ARL14EPQ8N8R7 260 aaPredicted RBP18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 C11orf70Q9BRQ4 267 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 ISCUQ9H1K1 167 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 CCSER2Q9H7U1 834 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 LUC7LQ9NQ29 371 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 STAP1Q9ULZ2 295 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 HBS1LQ9Y450 684 aaKnown RBP18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 MYH10P35580 1976 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 C5orf42Q9H799 3197 aa18.73■□□□□ 0.59
SSSCA1-201ENST00000309328 GREB1Q4ZG55 1949 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 PIK3R2O00459 728 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 SLC9A3R1O14745 358 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 NRDCO43847 1150 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 FTLP02792 175 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 NCAM1P13591 858 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 FECHP22830 423 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 SP100P23497 879 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 C10orf76Q5T2E6 689 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 ALKBH5Q6P6C2 394 aaKnown RBP18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 MFSD6LQ8IWD5 586 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 MCOLN2Q8IZK6 566 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 ADAMTS19Q8TE59 1207 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 USP13Q92995 863 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 SERPINB11Q96P15 392 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 SLC2A13Q96QE2 648 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 NHEJ1Q9H9Q4 299 aaPredicted RBP18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 KCNK12Q9HB15 430 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 PARVAQ9NVD7 372 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 OSER1Q9NX31 292 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 MARCH2Q9P0N8 246 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 LIMD1Q9UGP4 676 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 SCINQ9Y6U3 715 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 NOTCH4Q99466 2003 aa18.72■□□□□ 0.59
SSSCA1-201ENST00000309328 NRG2O14511 850 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 DAB1O75553 588 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 IPO7O95373 1038 aaKnown RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 PSMC3P17980 439 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 FCARP24071 287 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 GBP1P32455 592 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 NOS2P35228 1153 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 CYLC1P35663 651 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 PTP4A2Q12974 167 aa18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 ASTE1Q2TB18 679 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 CC2D1AQ6P1N0 951 aaPredicted RBP18.71■□□□□ 0.59
SSSCA1-201ENST00000309328 DNAJC24Q6P3W2 148 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms