RNA–Protein interactions for RNA: ENST00000308354.11

PDLIM2-202, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,236 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-202ENST00000308354 PCSK1P29120 753 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 PTPN9P43378 593 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 ARSEP51690 589 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 ATN1P54259 1190 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 BOLA3Q53S33 107 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 PPP6R3Q5H9R7 873 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 FAM182AQ5T1J6 154 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 DRICH1Q6PGQ1 229 aaPredicted RBP23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 HFE2Q6ZVN8 426 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 ALLCQ8N6M5 410 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 OR10T2Q8NGX3 314 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 SLC35B2Q8TB61 432 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 TLCD1Q96CP7 247 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 MAK16Q9BXY0 300 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 COX16Q9P0S2 106 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 SLC12A6Q9UHW9 1150 aa23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 MKI67P46013 3256 aaKnown RBP23.42■■□□□ 1.34
PDLIM2-202ENST00000308354 SGK1O00141 431 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 NRP1O14786 923 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 IL4RP24394 825 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 P3H1Q32P28 736 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 NOMO2Q5JPE7 1267 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 DCLRE1AQ6PJP8 1040 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 LRRTM3Q86VH5 581 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 EPS8L3Q8TE67 593 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 KCTD13Q8WZ19 329 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 ULBP1Q9BZM6 244 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 DNAJB4Q9UDY4 337 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 PRG3Q9Y2Y8 225 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 M0QZQ0 153 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 ACSL3O95573 720 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 DESP17661 470 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 GDF10P55107 478 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 PPP2R2AP63151 447 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 FAM189BP81408 668 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 OVOS1Q6IE37 1185 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 TRMT10CQ7L0Y3 403 aaKnown RBP23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 NKD2Q969F2 451 aaPredicted RBP23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 UROC1Q96N76 676 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 RNF208Q9H0X6 261 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 RSPH14Q9UHP6 348 aa23.41■■□□□ 1.34
PDLIM2-202ENST00000308354 BDNFP23560 247 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 SCNN1AP37088 669 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 MATKP42679 507 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 YWHAZP63104 245 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 LMNB2Q03252 620 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 RNASELQ05823 741 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 SYPL2Q5VXT5 272 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 IZUMO3Q5VZ72 239 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 CCDC185Q8N715 623 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 CENPIQ92674 756 aaPredicted RBP23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 ACBD6Q9BR61 282 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 PCDH18Q9HCL0 1135 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 TBC1D13Q9NVG8 400 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 DRG1Q9Y295 367 aaKnown RBP23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 CYP11A1P05108 521 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 SLCO1A2P46721 670 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 OR1G1P47890 313 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 SULT1E1P49888 294 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 CAV1Q03135 178 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 C1orf228Q6PIY5 440 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 FAM131BQ86XD5 332 aa23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 PAK6Q9NQU5 681 aaPredicted RBP23.4■■□□□ 1.34
PDLIM2-202ENST00000308354 INPPL1O15357 1258 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 MAP3K6O95382 1288 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 ITGAVP06756 1048 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 USP17L7P0C7H9 530 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 GATMP50440 423 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 INTS6LQ5JSJ4 861 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 ERMARDQ5T6L9 678 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 ARCQ7LC44 396 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 SPATA18Q8TC71 538 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 PGM2Q96G03 612 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 SUSD3Q96L08 255 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 RNF157Q96PX1 679 aa23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 DHX35Q9H5Z1 703 aaKnown RBP23.39■■□□□ 1.34
PDLIM2-202ENST00000308354 YJEFN3A6XGL0 299 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 E7ENQ6 273 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 APOC4-APOC2K7ER74 178 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 APOC2P02655 101 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 NRLP54845 237 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 BCAR1P56945 870 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 GPS1Q13098 491 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 TCTN1Q2MV58 587 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 ZC3H18Q86VM9 953 aaKnown RBP23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 MAP7D3Q8IWC1 876 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 TAB3Q8N5C8 712 aaPredicted RBP23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 TEKT4Q8WW24 435 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 SMARCD1Q96GM5 515 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 SCLYQ96I15 445 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 TMPRSS4Q9NRS4 437 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 NAALADL1Q9UQQ1 740 aa23.39■■□□□ 1.33
PDLIM2-202ENST00000308354 ENPP3O14638 875 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 OR4Q2P0C623 313 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 EIF3EP60228 445 aaKnown RBP23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 DSC1Q08554 894 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 BFSP2Q13515 415 aa23.38■■□□□ 1.33
PDLIM2-202ENST00000308354 ANKRD20A8PQ5CZ79 823 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms