RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 TTLL13PA6NNM8 815 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PDXKO00764 312 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PLA2G6O60733 806 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 NDUFB10O96000 172 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PCNX4Q63HM2 1172 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 SLC13A5Q86YT5 568 aaPredicted RBP13.01□□□□□ -0.33
USP38-201ENST00000307017 FAM172AQ8WUF8 416 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 RNF145Q96MT1 663 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 RPRD1AQ96P16 312 aaPredicted RBP13.01□□□□□ -0.33
USP38-201ENST00000307017 FUT8Q9BYC5 575 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PGM3O95394 542 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 CYP4B1P13584 511 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 TCF7P36402 384 aaPredicted RBP13.01□□□□□ -0.33
USP38-201ENST00000307017 TAP1Q03518 808 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 MICALL2Q8IY33 904 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 ANKS1AQ92625 1134 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 MAN1C1Q9NR34 630 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 ZNF222Q9UK12 451 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 DUSP12Q9UNI6 340 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 O00370 1275 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 SHBGP04278 402 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 RALBP11234 206 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 FDPSP14324 419 aaKnown RBP13.01□□□□□ -0.33
USP38-201ENST00000307017 AKAP5P24588 427 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 NOS3P29474 1203 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 YWHAZP63104 245 aaKnown RBP13.01□□□□□ -0.33
USP38-201ENST00000307017 ITGA9Q13797 1035 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 ARMC4Q5T2S8 1044 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 PIGKQ92643 395 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 TATDN2Q93075 761 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 CDY2AQ9Y6F7 541 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 CDY1Q9Y6F8 540 aa13.01□□□□□ -0.33
USP38-201ENST00000307017 CLCN3P51790 818 aa13□□□□□ -0.33
USP38-201ENST00000307017 MRPS22P82650 360 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 EXOSC10Q01780 885 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 INAQ16352 499 aa13□□□□□ -0.33
USP38-201ENST00000307017 MACC1Q6ZN28 852 aa13□□□□□ -0.33
USP38-201ENST00000307017 RXFP2Q8WXD0 754 aa13□□□□□ -0.33
USP38-201ENST00000307017 MED15Q96RN5 788 aa13□□□□□ -0.33
USP38-201ENST00000307017 C7orf25Q9BPX7 421 aa13□□□□□ -0.33
USP38-201ENST00000307017 TMEM94Q12767 1356 aa13□□□□□ -0.33
USP38-201ENST00000307017 FOXO6A8MYZ6 492 aa13□□□□□ -0.33
USP38-201ENST00000307017 H3BN98 237 aa13□□□□□ -0.33
USP38-201ENST00000307017 CBX4O00257 560 aa13□□□□□ -0.33
USP38-201ENST00000307017 NUDT14O95848 222 aa13□□□□□ -0.33
USP38-201ENST00000307017 RAD23AP54725 363 aa13□□□□□ -0.33
USP38-201ENST00000307017 SAMD7Q7Z3H4 446 aa13□□□□□ -0.33
USP38-201ENST00000307017 POLNQ7Z5Q5 900 aa13□□□□□ -0.33
USP38-201ENST00000307017 SERHL2Q9H4I8 314 aa13□□□□□ -0.33
USP38-201ENST00000307017 ANKZF1Q9H8Y5 726 aa13□□□□□ -0.33
USP38-201ENST00000307017 SERHLQ9NQF3 203 aa13□□□□□ -0.33
USP38-201ENST00000307017 TMEM51Q9NW97 253 aa13□□□□□ -0.33
USP38-201ENST00000307017 PFASO15067 1338 aa13□□□□□ -0.33
USP38-201ENST00000307017 MGAT1P26572 445 aa13□□□□□ -0.33
USP38-201ENST00000307017 ABCD1P33897 745 aa13□□□□□ -0.33
USP38-201ENST00000307017 UBAP2LQ14157 1087 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 ZNF618Q5T7W0 954 aa13□□□□□ -0.33
USP38-201ENST00000307017 KHDRBS2Q5VWX1 349 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 SEL1L3Q68CR1 1132 aa13□□□□□ -0.33
USP38-201ENST00000307017 KRT78Q8N1N4 520 aa13□□□□□ -0.33
USP38-201ENST00000307017 NSUN4Q96CB9 384 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 SPACA7Q96KW9 195 aa13□□□□□ -0.33
USP38-201ENST00000307017 KIFC1Q9BW19 673 aa13□□□□□ -0.33
USP38-201ENST00000307017 EIF3LQ9Y262 564 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 PDS5AQ29RF7 1337 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 A8MUI8 341 aa13□□□□□ -0.33
USP38-201ENST00000307017 RPA3P35244 121 aaPredicted RBP13□□□□□ -0.33
USP38-201ENST00000307017 HARS2P49590 506 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 SCRN3Q0VDG4 424 aa13□□□□□ -0.33
USP38-201ENST00000307017 EPHA7Q15375 998 aa13□□□□□ -0.33
USP38-201ENST00000307017 BHLHE22Q8NFJ8 381 aaPredicted RBP13□□□□□ -0.33
USP38-201ENST00000307017 FBXO30Q8TB52 745 aa13□□□□□ -0.33
USP38-201ENST00000307017 TBATAQ96M53 351 aa13□□□□□ -0.33
USP38-201ENST00000307017 ZNF560Q96MR9 790 aa13□□□□□ -0.33
USP38-201ENST00000307017 LIMD1Q9UGP4 676 aa13□□□□□ -0.33
USP38-201ENST00000307017 TRIM24O15164 1050 aa13□□□□□ -0.33
USP38-201ENST00000307017 TNFRSF21O75509 655 aa13□□□□□ -0.33
USP38-201ENST00000307017 ATG7O95352 703 aa13□□□□□ -0.33
USP38-201ENST00000307017 CCNG1P51959 295 aa13□□□□□ -0.33
USP38-201ENST00000307017 TP53BP2Q13625 1128 aa13□□□□□ -0.33
USP38-201ENST00000307017 CDC42EP5Q6NZY7 148 aa13□□□□□ -0.33
USP38-201ENST00000307017 MRPS26Q9BYN8 205 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 PCDHGA3Q9Y5H0 932 aa13□□□□□ -0.33
USP38-201ENST00000307017 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13□□□□□ -0.33
USP38-201ENST00000307017 TRDMT1O14717 391 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 ZC3H11AO75152 810 aaKnown RBP eCLIP13□□□□□ -0.33
USP38-201ENST00000307017 MRPS35P82673 323 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 N4BP2L1Q5TBK1 243 aaPredicted RBP13□□□□□ -0.33
USP38-201ENST00000307017 TMED8Q6PL24 325 aaPredicted RBP13□□□□□ -0.33
USP38-201ENST00000307017 TINF2Q9BSI4 451 aa13□□□□□ -0.33
USP38-201ENST00000307017 MRPS7Q9Y2R9 242 aaKnown RBP13□□□□□ -0.33
USP38-201ENST00000307017 PSMD14O00487 310 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 THPOP40225 353 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 ARMC6Q6NXE6 501 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 KLHL24Q6TFL4 600 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 RNFT2Q96EX2 444 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.99□□□□□ -0.33
USP38-201ENST00000307017 AK5Q9Y6K8 562 aa12.99□□□□□ -0.33
USP38-201ENST00000307017 SAMD9Q5K651 1589 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms