RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 SLC20A1Q8WUM9 679 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RSPRY1Q96DX4 576 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 C1QTNF1Q9BXJ1 281 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 SLC4A5Q9BY07 1137 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 EDEM3Q9BZQ6 932 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 RNF38Q9H0F5 515 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 NUCKS1Q9H1E3 243 aaKnown RBP11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 EPHX3Q9H6B9 360 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ARHGEF3Q9NR81 526 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 OSER1Q9NX31 292 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 WNT16Q9UBV4 365 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 ITIH6Q6UXX5 1313 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 MYOFQ9NZM1 2061 aa11.53□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 TECTAO75443 2155 aa11.52□□□□□ -0.56
CSPG4P1Y-201ENST00000306641 A0A1W2PQJ5 194 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TMEM221A6NGB7 291 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 YJEFN3A6XGL0 299 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 E7ENQ6 273 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 M0R296 226 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 STK25O00506 426 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC9A3R1O14745 358 aaPredicted RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CAPN9O14815 690 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 RPL34P49207 117 aaKnown RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KPNA1P52294 538 aaPredicted RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 EFEMP1Q12805 493 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TRIM14Q14142 442 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PDGFRLQ15198 375 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MLF2Q15773 248 aaPredicted RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NAA35Q5VZE5 725 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BSPRYQ5W0U4 402 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 OR6B2Q6IFH4 312 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ERICH1Q86X53 443 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MIB1Q86YT6 1006 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SIX5Q8N196 739 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZNF276Q8N554 614 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CLEC4CQ8WTT0 213 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 OSCP1Q8WVF1 389 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DDX1Q92499 740 aaKnown RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BAP1Q92560 729 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NDRG1Q92597 394 aaKnown RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ATP2A3Q93084 1043 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SHDQ96IW2 340 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZFYVE19Q96K21 471 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CPXM1Q96SM3 734 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TRIM5Q9C035 493 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 DUS2Q9NX74 493 aaKnown RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CFAP97Q9P2B7 532 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CYTH4Q9UIA0 394 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NOCTQ9UK39 431 aaKnown RBP11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NUDT5Q9UKK9 219 aa11.52□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KIAA1549LQ6ZVL6 1849 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KMT2EQ8IZD2 1858 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 VCANP13611 3396 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 E2F8A0AVK6 867 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FAM86C2PA6NEL3 165 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MDM4O15151 490 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NFATC1O95644 943 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TBX18O95935 607 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NCAM1P13591 858 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CDH5P33151 784 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PBX1P40424 430 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NSFP46459 744 aaKnown RBP11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PGFP49763 221 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NOMO3P69849 1222 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 COG7P83436 770 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 FMO1Q01740 532 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PRKCQQ04759 706 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PTPN20Q4JDL3 420 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TDRD12Q587J7 1177 aaKnown RBP11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TMEM31Q5JXX7 168 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TPRG1Q6ZUI0 275 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 BHLHA9Q7RTU4 235 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TMEM110Q86TL2 294 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZDHHC17Q8IUH5 632 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SCUBE3Q8IX30 993 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 CPA6Q8N4T0 437 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KIAA1958Q8N8K9 716 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 EDEM1Q92611 657 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 EXOC4Q96A65 974 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MSANTD3Q96H12 275 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TTYH3Q9C0H2 523 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TRPV5Q9NQA5 729 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HEBP1Q9NRV9 189 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GKN1Q9NS71 199 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 MARCH2Q9P0N8 246 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TBC1D14Q9P2M4 693 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 WNT6Q9Y6F9 365 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 COL4A3Q01955 1670 aa11.51□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 SLC12A8A0AV02 714 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 PAPSS1O43252 624 aaPredicted RBP11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HSF2BPO75031 334 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ERBB2P04626 1255 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 GLI1P08151 1106 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 HMBSP08397 361 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 TNFAIP3P21580 790 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 ZBED6P86452 979 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 AMPD2Q01433 879 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 KLHL30Q0D2K2 578 aa11.5□□□□□ -0.57
CSPG4P1Y-201ENST00000306641 NR1H3Q13133 447 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms