RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 PCED1BQ96HM7 432 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 KCNK16Q96T55 309 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 SMOQ99835 787 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 WDR83Q9BRX9 315 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 FOXP3Q9BZS1 431 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 EPN3Q9H201 632 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 SAYSD1Q9NPB0 183 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 SRRDQ9UH36 339 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 DDX20Q9UHI6 824 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 SHOC2Q9UQ13 582 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 F8W810 466 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 NRP1O14786 923 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MCF2LO15068 1137 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 ALOX15BO15296 676 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 FYNP06241 537 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 CREB1P16220 341 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 GCAP28676 217 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 RPL9P32969 192 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 SLC10A2Q12908 348 aaPredicted RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 TFDP2Q14188 446 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MBTPS1Q14703 1052 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 PAN2Q504Q3 1202 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 PPP6R3Q5H9R7 873 aaPredicted RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 SYPL2Q5VXT5 272 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 TRAF7Q6Q0C0 670 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 RTN4RL1Q86UN2 441 aaPredicted RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 EXOC3L1Q86VI1 746 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MAP7D3Q8IWC1 876 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 HACE1Q8IYU2 909 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 TMEM86AQ8N2M4 240 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 CAPNS2Q96L46 248 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 SERPINB12Q96P63 405 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 RHOBTB2Q9BYZ6 727 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 TMPRSS4Q9NRS4 437 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 KRT82Q9NSB4 513 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 EURLQ9NYK6 297 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.82□□□□□ -1.32
USP47-201ENST00000305481 TMEM63AO94886 807 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 RPLP2P05387 115 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 IBSPP21815 317 aaPredicted RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 LHX1P48742 406 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 YWHAZP63104 245 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 ROR1Q01973 937 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 SLC25A52Q3SY17 297 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 EFHC1Q5JVL4 640 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 DARS2Q6PI48 645 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 CTU1Q7Z7A3 348 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 ZNF598Q86UK7 904 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 VSIG1Q86XK7 387 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 PPIL6Q8IXY8 311 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 PYROXD2Q8N2H3 581 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 PCSK9Q8NBP7 692 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 CD99L2Q8TCZ2 262 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 KCTD15Q96SI1 283 aaPredicted RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 SYT15Q9BQS2 421 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 ZNF670Q9BS34 389 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 NRDE2Q9H7Z3 1164 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 MFHAS1Q9Y4C4 1052 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 HEY1Q9Y5J3 304 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.82□□□□□ -1.32
USP47-201ENST00000305481 USP3Q9Y6I4 520 aa6.82□□□□□ -1.32
USP47-201ENST00000305481 ZNF487B1APH4 448 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 HHLA1C9JL84 531 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 B4GALT3O60512 393 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TRPA1O75762 1119 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 ITGB1P05556 798 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 IVLP07476 585 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 ABHD2P08910 425 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CYP2F1P24903 491 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 STIP1P31948 543 aaKnown RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 PSEN1P49768 467 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 GPX6P59796 221 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 GBE1Q04446 702 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 DCAF6Q58WW2 860 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 DSTYKQ6XUX3 929 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 STRADAQ7RTN6 431 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CROCCP2Q86T23 111 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 FAM35AQ86V20 835 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 MED10Q9BTT4 135 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TRPV6Q9H1D0 765 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 DHX35Q9H5Z1 703 aaKnown RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 UBN1Q9NPG3 1134 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CWC15Q9P013 229 aaKnown RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 AP4E1Q9UPM8 1137 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TSC2P49815 1807 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 YJEFN3A6XGL0 299 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 E7ENQ6 273 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 APOL1O14791 398 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TRAPPC3O43617 180 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CAPN15O75808 1086 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 AMHP03971 560 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CHN1P15882 459 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TGM2P21980 687 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 BRCC3P46736 316 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 CCT5P48643 541 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 RAB27AP51159 221 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 TKTL1P51854 596 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 BCAR1P56945 870 aa6.81□□□□□ -1.32
USP47-201ENST00000305481 PDIA2Q13087 525 aaKnown RBP6.81□□□□□ -1.32
USP47-201ENST00000305481 MTM1Q13496 603 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms