RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 UGT1A8Q9HAW9 530 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 GBA2Q9HCG7 927 aaPredicted RBP13.42□□□□□ -0.26
HIF3A-204ENST00000300862 SH3BP1Q9Y3L3 701 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 SCN1AP35498 2009 aa13.42□□□□□ -0.26
HIF3A-204ENST00000300862 TSPAN1O60635 241 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 DCTN3O75935 186 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 EPHB2P29323 1055 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 SKIV2L2P42285 1042 aaKnown RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 CCNG1P51959 295 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 ACAP1Q15027 740 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 CDHR3Q6ZTQ4 885 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 C7orf31Q8N865 590 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 NETO2Q8NC67 525 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 CLEC4CQ8WTT0 213 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 OPTNQ96CV9 577 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 PRR11Q96HE9 360 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 FAM167BQ9BTA0 163 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 SNRNP25Q9BV90 132 aaKnown RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 PCDH18Q9HCL0 1135 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 ZFP69BQ9UJL9 534 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 CORO1CQ9ULV4 474 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 TRIP11Q15643 1979 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 KIF3CO14782 793 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 BGNP21810 368 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 ADCYAP1R1P41586 468 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 YWHAZP63104 245 aaKnown RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 INCA1Q0VD86 236 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 TFDP2Q14188 446 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 KIZQ2M2Z5 673 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 FYB2Q5VWT5 728 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 OLFML1Q6UWY5 402 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 ARMC2Q8NEN0 867 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 SLC44A1Q8WWI5 657 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 KHSRPQ92945 711 aaKnown RBP eCLIP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 ZMAT2Q96NC0 199 aaKnown RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 TBC1D10AQ9BXI6 508 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 LRMDAQ9H2I8 198 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 VRTNQ9H8Y1 702 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 NKX1-2Q9UD57 310 aaPredicted RBP13.41□□□□□ -0.26
HIF3A-204ENST00000300862 FETUBQ9UGM5 382 aa13.41□□□□□ -0.26
HIF3A-204ENST00000300862 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 EIF4E1BA6NMX2 242 aaKnown RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 APOL1O14791 398 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 LIN7AO14910 233 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 ZBED1O96006 694 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 BMPR2Q13873 1038 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 FAM187BQ17R55 369 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 ZNF484Q5JVG2 852 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 LONP2Q86WA8 852 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 C18orf25Q96B23 403 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 NFKBIZQ9BYH8 718 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 DPEP3Q9H4B8 488 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 PLAC1Q9HBJ0 212 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 SSU72Q9NP77 194 aaKnown RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 FBXO6Q9NRD1 293 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 OTOFQ9HC10 1997 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 IQANK1A0A1B0GTG1 560 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 SPDYE5A6NIY4 337 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 TRIM49D1C9J1S8 452 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 CXCL11O14625 94 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 TM9SF1O15321 606 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 PAPSS1O43252 624 aaPredicted RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 WFS1O76024 890 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 LINGO3P0C6S8 592 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 SDC4P31431 198 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 GBE1Q04446 702 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 FAM47CQ5HY64 1035 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 TAPT1Q6NXT6 567 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 CLNKQ7Z7G1 428 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 CAND1Q86VP6 1230 aaKnown RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 ANKRD13AQ8IZ07 590 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 MECRQ9BV79 373 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 TSSK1BQ9BXA7 367 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 PHACTR1Q9C0D0 580 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 SNTG2Q9NY99 539 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 TUBGCP4Q9UGJ1 667 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 ZC3H7BQ9UGR2 993 aaKnown RBP13.4□□□□□ -0.26
HIF3A-204ENST00000300862 ITGA11Q9UKX5 1188 aa13.4□□□□□ -0.26
HIF3A-204ENST00000300862 A6NHS1 94 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 NPTXRO95502 500 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 PDGFRBP09619 1106 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 TROVE2P10155 538 aaKnown RBP eCLIP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 GM2AP17900 193 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 GRIA1P42261 906 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 HDAC4P56524 1084 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 INHBEP58166 350 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 TAF11Q15544 211 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 SMAD1Q15797 465 aaKnown RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 MTHFD1LQ6UB35 978 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 MAP7D3Q8IWC1 876 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 MPP5Q8N3R9 675 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 LINC01465Q8N7H1 131 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 FAM13CQ8NE31 585 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 RAB3IPQ96QF0 476 aaPredicted RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 SGIP1Q9BQI5 828 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 SLC13A1Q9BZW2 595 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 VPS11Q9H270 941 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 SMYD2Q9NRG4 433 aa13.39□□□□□ -0.27
HIF3A-204ENST00000300862 ADARB2Q9NS39 739 aaKnown RBP13.39□□□□□ -0.27
HIF3A-204ENST00000300862 HEY2Q9UBP5 337 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms