RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 AMHP03971 560 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 CD48P09326 243 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 OR4Q2P0C623 313 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 RAG1P15918 1043 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 TFE3P19532 575 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 ARSEP51690 589 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 RABGGTBP53611 331 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 KRT17Q04695 432 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 BYSLQ13895 437 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 TFDP2Q14188 446 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 PM20D1Q6GTS8 502 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 NPY6RQ99463 290 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 SNRNP25Q9BV90 132 aaKnown RBP16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 ABI2Q9NYB9 513 aaPredicted RBP16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 PCDHB5Q9Y5E4 795 aa16.39■□□□□ 0.21
HERPUD1-201ENST00000300302 NLRC5Q86WI3 1866 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 KIAA0355O15063 1070 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 CYP2F1P24903 491 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 ITGB8P26012 769 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 RDXP35241 583 aaKnown RBP16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 GPS2Q13227 327 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 DPYSL3Q14195 570 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 VSTM1Q6UX27 236 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 ANKS3Q6ZW76 656 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 ZNF365Q70YC5 407 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 TMEM199Q8N511 208 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 TOP1MTQ969P6 601 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM129AQ9BZQ8 928 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 HCSTQ9UBK5 93 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 USP3Q9Y6I4 520 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 PTPRDP23468 1912 aa16.38■□□□□ 0.21
HERPUD1-201ENST00000300302 TRIM43BA6NCK2 446 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ZNF487B1APH4 448 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 NT5C1B-RDH14C9J2C7 533 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 M0QYT0 321 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 TRIM66O15016 1216 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ECHS1P30084 290 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 DYNLT1P63172 113 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 SMARCB1Q12824 385 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 PTK6Q13882 451 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 HFE2Q6ZVN8 426 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 GSTA5Q7RTV2 222 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 PSTKQ8IV42 348 aaKnown RBP16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 TRIM43Q96BQ3 446 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM118BQ9BPY3 351 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ZNF670Q9BS34 389 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 TTPALQ9BTX7 342 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 OGFRQ9NZT2 677 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 NAALADL1Q9UQQ1 740 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ZNF148Q9UQR1 794 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 DRG1Q9Y295 367 aaKnown RBP16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 SNX24Q9Y343 169 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 APOC4-APOC2K7ER74 178 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 APOC2P02655 101 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 NCAM1P13591 858 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 DEUP1Q05D60 604 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 DPYSL2Q16555 572 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ZC3H12AQ5D1E8 599 aaKnown RBP16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 SYPL2Q5VXT5 272 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 MFSD5Q6N075 450 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 BNIPLQ7Z465 357 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 CCDC89Q8N998 374 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 CCHCR1Q8TD31 782 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 NKD2Q969F2 451 aaPredicted RBP16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 VWCEQ96DN2 955 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ADAM33Q9BZ11 813 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 PCDH18Q9HCL0 1135 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 ASIC3Q9UHC3 531 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 DNPEPQ9ULA0 475 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 AP4E1Q9UPM8 1137 aa16.37■□□□□ 0.21
HERPUD1-201ENST00000300302 VWA8A3KMH1 1905 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 LTBP2Q14767 1821 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 PATJQ8NI35 1801 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 F9P00740 461 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 FYNP06241 537 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 ITGAVP06756 1048 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 CPB1P15086 417 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 CSF2RAP15509 400 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 PBX3P40426 434 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 MAGEA11P43364 429 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 RPL21P46778 160 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 SLC5A3P53794 718 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 ATXN1P54253 815 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 AIF1P55008 147 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 VCPP55072 806 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 CALCOCO2Q13137 446 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 BEND5Q7L4P6 421 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 UBE2Q1Q7Z7E8 422 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 SCN4BQ8IWT1 228 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 SLC7A14Q8TBB6 771 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM71BQ8TC56 605 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 HAUS1Q96CS2 278 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 C8orf48Q96LL4 319 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 RNF157Q96PX1 679 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 SLC9A7Q96T83 725 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 DHX35Q9H5Z1 703 aaKnown RBP16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 GPATCH2LQ9NWQ4 482 aa16.36■□□□□ 0.21
HERPUD1-201ENST00000300302 FAM53CQ9NYF3 392 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms