RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 DKC1O60832 514 aaKnown RBP eCLIP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 VNN1O95497 513 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ITGAXP20702 1163 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 SLC5A2P31639 672 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 PIGHQ14442 188 aaPredicted RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 SMAD1Q15797 465 aaKnown RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 FASTKD1Q53R41 847 aaKnown RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 C6orf52Q5T4I8 152 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ANGEL2Q5VTE6 544 aaKnown RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ACER1Q8TDN7 264 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 LRRN4Q8WUT4 740 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 FBXL18Q96ME1 805 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF778Q96MU6 729 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 Q9H521 79 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 C17orf75Q9HAS0 396 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 XPNPEP1Q9NQW7 623 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 RAB6BQ9NRW1 208 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 PNPOQ9NVS9 261 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 NUB1Q9Y5A7 615 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 C3orf70A6NLC5 250 aaPredicted RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 SNNO75324 88 aaPredicted RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 MYBPC1Q00872 1141 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 CBX3Q13185 183 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 TAF5Q15542 800 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ZACNQ401N2 412 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 FRMD7Q6ZUT3 714 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ZNF554Q86TJ5 538 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 MARVELD2Q8N4S9 558 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 CCDC33Q8N5R6 958 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 KCTD6Q8NC69 237 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 ACTRT2Q8TDY3 377 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 DMTF1Q9Y222 760 aa13.5□□□□□ -0.25
TVP23A-201ENST00000299866 MRPL11Q9Y3B7 192 aaKnown RBP13.5□□□□□ -0.25
TVP23A-201ENST00000299866 DHX15O43143 795 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 CSH1P0DML2 217 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 CSH2P0DML3 217 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 RFC1P35251 1148 aaPredicted RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 EMP3P54852 163 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 SFSWAPQ12872 951 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 TUBB3Q13509 450 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 CYTH1Q15438 398 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 BBS12Q6ZW61 710 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 PQLC1Q8N2U9 271 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 PIWIL2Q8TC59 973 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 LRGUKQ96M69 825 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 FAM198AQ9UFP1 575 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 ASTN2O75129 1339 aaPredicted RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 ARHGAP10A1A4S6 786 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 H7C0C1 242 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 DCXO43602 365 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 AP1G1O43747 822 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 TRMUO75648 421 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 MAP3K6O95382 1288 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 CALB1P05937 261 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 KDELR1P24390 212 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 HSPA1LP34931 641 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 ATP5OP48047 213 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 HDAC4P56524 1084 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 NLRP11P59045 1033 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 PPP6R3Q5H9R7 873 aaPredicted RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 OGFRL1Q5TC84 451 aaPredicted RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 PDPK2PQ6A1A2 396 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 CC2D2BQ6DHV5 1058 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 TATDN1Q6P1N9 297 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 C15orf39Q6ZRI6 1047 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 AMIGO2Q86SJ2 522 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 PHTF2Q8N3S3 785 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 FBXW8Q8N3Y1 598 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 EMC1Q8N766 993 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 TFB1MQ8WVM0 346 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 CSRNP1Q96S65 589 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 MRPS26Q9BYN8 205 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 SENP6Q9GZR1 1112 aaPredicted RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 RBM38Q9H0Z9 239 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 FAF1Q9UNN5 650 aaPredicted RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 TELO2Q9Y4R8 837 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 A0A1B0GTW7 788 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 SLC1A6P48664 564 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 MRPS22P82650 360 aaKnown RBP13.49□□□□□ -0.25
TVP23A-201ENST00000299866 PDK1Q15118 436 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 SEZ6Q53EL9 994 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 KLHL35Q6PF15 583 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 FBXO28Q9NVF7 368 aa13.49□□□□□ -0.25
TVP23A-201ENST00000299866 STAM2O75886 525 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 KRT38O76015 456 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 C4BPAP04003 597 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 TSHRP16473 764 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 MMRN1Q13201 1228 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 GPAT2Q6NUI2 795 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 TRMT10BQ6PF06 316 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 KBTBD6Q86V97 674 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 RNF168Q8IYW5 571 aaPredicted RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 JOSD2Q8TAC2 188 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 SIKE1Q9BRV8 207 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 COA1Q9GZY4 146 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 COPS7BQ9H9Q2 264 aaPredicted RBP13.48□□□□□ -0.25
TVP23A-201ENST00000299866 MAN1C1Q9NR34 630 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 TJP2Q9UDY2 1190 aa13.48□□□□□ -0.25
TVP23A-201ENST00000299866 CCNL1Q9UK58 526 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms