RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 RHOAP61586 193 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RXFP2Q8WXD0 754 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 USP6NLQ92738 828 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ERGIC2Q96RQ1 377 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SETD4Q9NVD3 440 aa13.98□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GPR75-ASB3A0A0A6YYF3 556 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 P4HA2O15460 535 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RHOCP08134 193 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ATP6AP1LQ52LC2 224 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CLEC17AQ6ZS10 378 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 C16orf59Q7L2K0 433 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 OR8H2Q8N162 312 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 KCTD14Q9BQ13 255 aaPredicted RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CXorf56Q9H5V9 222 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GPAMQ9HCL2 828 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 AAR2Q9Y312 384 aaKnown RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FAM205AQ6ZU69 1335 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 OGTO15294 1046 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TOMM70O94826 608 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TKTL1P51854 596 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ARHGEF19Q8IW93 802 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TRPC4APQ8TEL6 797 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TPD52L3Q96J77 140 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PPP1R10Q96QC0 940 aaKnown RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PXMP2Q9NR77 195 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RPS6KB2Q9UBS0 482 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MMRN1Q13201 1228 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SEL1L3Q68CR1 1132 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 LRRC8DQ7L1W4 858 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TMEM169Q96HH4 297 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 YME1L1Q96TA2 773 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ATXN3LQ9H3M9 355 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CISHQ9NSE2 258 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TRPC4Q9UBN4 977 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 N6AMT1Q9Y5N5 214 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GPR182O15218 404 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 VDRP11473 427 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SLC2A4P14672 509 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 DSG3P32926 999 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SCTRP47872 440 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RFX5P48382 616 aaPredicted RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PPATQ06203 517 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 BNC2Q6ZN30 1099 aaPredicted RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 NACC2Q96BF6 587 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 FAM153AQ9UHL3 310 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GTF3C4Q9UKN8 822 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CEP152O94986 1710 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PCDH8O95206 1070 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CAP2P40123 477 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SARSP49591 514 aaKnown RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TMED10P49755 219 aaKnown RBP13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 DEFA1P59665 94 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 DEFA3P59666 94 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CSNK2BP67870 215 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RASA2Q15283 850 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 NFIL3Q16649 462 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 KDM7AQ6ZMT4 941 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RIPOR1Q6ZS17 1223 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TRAPPC12Q8WVT3 735 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 GLT1D1Q96MS3 346 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PPP1R2P1Q96PQ5 205 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CLPBQ9H078 707 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ZMYM5Q9UJ78 669 aa13.97□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MGAT4DA6NG13 374 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CLK2P49760 499 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 OASLQ15646 514 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TTLL9Q3SXZ7 439 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 BOLA3Q53S33 107 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ANKRD13AQ8IZ07 590 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 UXS1Q8NBZ7 420 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TMC2Q8TDI7 906 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CGRRF1Q99675 332 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PABPC3Q9H361 631 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 DYRK1BQ9Y463 629 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SPATA31A1Q5TZJ5 1347 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CKBP12277 381 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RRM2P31350 389 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CYP24A1Q07973 514 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SYN2Q92777 582 aaPredicted RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TMEM176AQ96HP8 235 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TMEM237Q96Q45 408 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SENP6Q9GZR1 1112 aaPredicted RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RMND5AQ9H871 391 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 ZSCAN5CA6NGD5 496 aaPredicted RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 HNRNPRO43390 633 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 APOA4P06727 396 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 PSMC3P17980 439 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 RGS2P41220 211 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CCNG1P51959 295 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 TRIM28Q13263 835 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 AGKQ53H12 422 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 LUZP2Q86TE4 346 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 IFNLR1Q8IU57 520 aaPredicted RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 AKT1S1Q96B36 256 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 MTIF3Q9H2K0 278 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 AGO4Q9HCK5 861 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 SMPD4Q9NXE4 827 aa13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 DDX43Q9NXZ2 648 aaKnown RBP13.96□□□□□ -0.17
CHRFAM7A-201ENST00000299847 CHD1O14646 1710 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms