RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 DCLK3Q9C098 648 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 SPON1Q9HCB6 807 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 USE1Q9NZ43 259 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 COPG1Q9Y678 874 aaKnown RBP17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 TP53BP2Q13625 1128 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 TRIM16LQ309B1 348 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 NT5DC1Q5TFE4 455 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 ADGRA1Q86SQ6 560 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 YIPF2Q9BWQ6 316 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 RMND5AQ9H871 391 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 CAB39Q9Y376 341 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 GUCA1CO95843 209 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 SLC26A2P50443 739 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 NCALDP61601 193 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 CYP51A1Q16850 503 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 PGBD3Q8N328 593 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 COLGALT1Q8NBJ5 622 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 DDHD1Q8NEL9 900 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 FICDQ9BVA6 458 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 AGO4Q9HCK5 861 aaKnown RBP17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 IL1RAPL1Q9NZN1 696 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 DDX20Q9UHI6 824 aaKnown RBP17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 DPEP1P16444 411 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 ARL4DP49703 201 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 ATP6AP1LQ52LC2 224 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 SYTL5Q8TDW5 730 aaPredicted RBP17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 ZNF606Q8WXB4 792 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 FAM136AQ96C01 138 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 C10orf88Q9H8K7 445 aa17.29■□□□□ 0.36
CNTNAP3-201ENST00000297668 MLNP12872 115 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 THPOP40225 353 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 ERVK-9P63128 1117 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 CSHL1Q14406 222 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 PDPK2PQ6A1A2 396 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 TMC3Q7Z5M5 1100 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 PXMP2Q9NR77 195 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 PCDHB7Q9Y5E2 793 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 DYTNA2CJ06 578 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 GPR182O15218 404 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 LZTS3O60299 673 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 VTNP04004 478 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 MAPTP10636 758 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 PWP1Q13610 501 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 NFIL3Q16649 462 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 C11orf96Q7Z7L8 435 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 MYO1HQ8N1T3 1032 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 CLPBQ9H078 707 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 LRRC4BQ9NT99 713 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 DNALI1O14645 258 aaPredicted RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 GHRP10912 638 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 CYP2F1P24903 491 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 ELK3P41970 407 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 ALDH7A1P49419 539 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 IZUMO2Q6UXV1 221 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 TDRD5Q8NAT2 981 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 SLC35C1Q96A29 364 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 KLHL4Q9C0H6 718 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 NCAM2O15394 837 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 STRNO43815 780 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 MAPK1P28482 360 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 OXCT1P55809 520 aa17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 BST2Q10589 180 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 EARS2Q5JPH6 523 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 DUSP9Q99956 384 aaKnown RBP17.28■□□□□ 0.36
CNTNAP3-201ENST00000297668 DDTLA6NHG4 134 aaPredicted RBP17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 NR5A2O00482 541 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CES2O00748 559 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 C2CD2LO14523 706 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 TOMM70O94826 608 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 NAIF1Q69YI7 327 aaPredicted RBP17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 ZBTB49Q6ZSB9 765 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 TMEM169Q96HH4 297 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 PNMA5Q96PV4 448 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 GPRC5DQ9NZD1 345 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 DOLKQ9UPQ8 538 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 TSC22D4Q9Y3Q8 395 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 RAD54BQ9Y620 910 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 SERPINI2O75830 405 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 RARRES1P49788 294 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CENPLQ8N0S6 344 aaPredicted RBP17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 HDAC7Q8WUI4 952 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CACNA2D2Q9NY47 1150 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 C6orf203Q9P0P8 240 aaPredicted RBP17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 VANGL2Q9ULK5 521 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CRTAMO95727 393 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CXCL8P10145 99 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 PYGMP11217 842 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 RPL21P46778 160 aaKnown RBP17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CNTN1Q12860 1018 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 AGKQ53H12 422 aa17.27■□□□□ 0.36
CNTNAP3-201ENST00000297668 CLPTM1O96005 669 aa17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 ITGALP20701 1170 aa17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 HUNKP57058 714 aa17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 OASLQ15646 514 aaKnown RBP17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 DEFB107AQ8IZN7 70 aa17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 SNRNP27Q8WVK2 155 aaKnown RBP17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 CPB2Q96IY4 423 aa17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 TBCBQ99426 244 aa17.27■□□□□ 0.35
CNTNAP3-201ENST00000297668 TCF7L2Q9NQB0 619 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms