RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 ERI1Q8IV48 349 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ATL1Q8WXF7 558 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 KCNN2Q9H2S1 579 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 HEATR9A2RTY3 570 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 RGL2O15211 777 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 TIE1P35590 1138 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 USP11P51784 963 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SKP1P63208 163 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 RHEBQ15382 184 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF827Q17R98 1081 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MEI1Q5TIA1 1274 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MREGQ8N565 214 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 C1QTNF1Q9BXJ1 281 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 GPR108Q9NPR9 543 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 SLC9A2Q9UBY0 812 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MAGED1Q9Y5V3 778 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PRDM15P57071 1507 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 TCOF1Q13428 1488 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 TSPAN1O60635 241 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 ENO2P09104 434 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PTDSS1P48651 473 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 RAB5BP61020 215 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 MCL1Q07820 350 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 PCID2Q5JVF3 399 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 LRRC31Q6UY01 552 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CAPN12Q6ZSI9 719 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 GET4Q7L5D6 327 aaPredicted RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CXXC5Q7LFL8 322 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CFAP206Q8IYR0 622 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 GTPBP2Q9BX10 602 aaKnown RBP4.98□□□□□ -1.61
CSMD3-201ENST00000297405 CYTH4Q9UIA0 394 aa4.98□□□□□ -1.61
CSMD3-201ENST00000297405 DFNA5O60443 496 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MAP3K6O95382 1288 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 KCNA1Q09470 495 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 BST2Q10589 180 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MSLNQ13421 630 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 INSCQ1MX18 579 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 TCEAL6Q6IPX3 200 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 KIF18BQ86Y91 864 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 ZBED8Q8IZ13 594 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 TMA16Q96EY4 203 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MTMR12Q9C0I1 747 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RSAD1Q9HA92 442 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 CABP1Q9NZU7 370 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 CLUHO75153 1309 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 A0A1W2PQ72 361 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RGSL1A5PLK6 1076 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MMP1P03956 469 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 ENO3P13929 434 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MAGEA6P43360 314 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PIK3CGP48736 1102 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 ACTR2P61160 394 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PRKAA1Q13131 559 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 TMEM44Q2T9K0 475 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 EIF2S3LQ2VIR3 472 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 DPH6Q7L8W6 267 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 KBTBD2Q8IY47 623 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 CD248Q9HCU0 757 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PCMTD2Q9NV79 361 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 UBA6A0AVT1 1052 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 GLRA3O75311 464 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 FCER2P06734 321 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 COX4I1P13073 169 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 FDFT1P37268 417 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 NUDT2P50583 147 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MAGEB6Q8N7X4 407 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 FANCBQ8NB91 859 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 UNKQ9C0B0 810 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 TTYH1Q9H313 450 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 KLHL8Q9P2G9 620 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 CDH9Q9ULB4 789 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 SNX7Q9UNH6 387 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MYL12BO14950 172 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PMPCBO75439 489 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PSIP1O75475 530 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RAB4BP61018 213 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PLEKHG6Q3KR16 790 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 LACTB2Q53H82 288 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 ZNF772Q68DY9 489 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 ZCCHC8Q6NZY4 707 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 KLHL24Q6TFL4 600 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 CLEC4GQ6UXB4 293 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 NELFCDQ8IXH7 590 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RP9Q8TA86 221 aaKnown RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MKL1Q969V6 931 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 FAM129BQ96TA1 746 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RERGLQ9H628 205 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RGS17Q9UGC6 210 aaPredicted RBP4.97□□□□□ -1.61
CSMD3-201ENST00000297405 RBP1P09455 135 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 SWI5Q1ZZU3 235 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 C1orf189Q5VU69 101 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PACS2Q86VP3 889 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MEIOBQ8N635 442 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 PLIN2Q99541 437 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 MYD88Q99836 296 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 HTATIP2Q9BUP3 242 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 LRMDAQ9H2I8 198 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 GOLPH3Q9H4A6 298 aa4.97□□□□□ -1.61
CSMD3-201ENST00000297405 ARHGAP28Q9P2N2 729 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms