RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 YWHAGP61981 247 aaKnown RBP eCLIP12.25□□□□□ -0.45
RHO-201ENST00000296271 KCNJ2P63252 427 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 FAM110CQ1W6H9 321 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 DCAF4L1Q3SXM0 396 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 LACTB2Q53H82 288 aaPredicted RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 KIAA0319Q5VV43 1072 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 CST9Q5W186 159 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 LVRNQ6Q4G3 990 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ARHGEF18Q6ZSZ5 1173 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 HFE2Q6ZVN8 426 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ECHDC2Q86YB7 292 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 UNC5BQ8IZJ1 945 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 FUKQ8N0W3 1084 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ADAM32Q8TC27 787 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 MZB1Q8WU39 189 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 LPPQ93052 612 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 WNT8BQ93098 351 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 SERAC1Q96JX3 654 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 MAGEB18Q96M61 343 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 TTC25Q96NG3 672 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 KDM4CQ9H3R0 1056 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 CNTN3Q9P232 1028 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 SLC17A6Q9P2U8 582 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 NUMBLQ9Y6R0 609 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 BPTFQ12830 3046 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PIRO00625 290 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 APOL1O14791 398 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 STAU1O95793 577 aaKnown RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 RARBP10826 455 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 GOT1P17174 413 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ADAM17P78536 824 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 FAAP100Q0VG06 881 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 OVGP1Q12889 678 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ITIH4Q14624 930 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 FAM228AQ86W67 206 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PDIK1LQ8N165 341 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ATP11CQ8NB49 1132 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PTPRN2Q92932 1015 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 SMC6Q96SB8 1091 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PITPNM3Q9BZ71 974 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 FOXP3Q9BZS1 431 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 RRAGCQ9HB90 399 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 SMYD2Q9NRG4 433 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 TMEM30AQ9NV96 361 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PSMC3IPQ9P2W1 217 aaPredicted RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 IPPQ9Y573 584 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 NRCAMQ92823 1304 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 MBLAC1A4D2B0 266 aaPredicted RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 E7ESA3 106 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 F7P08709 466 aaPredicted RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 CTSHP09668 335 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PSEN2P49810 448 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 YWHAZP63104 245 aaKnown RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 CRADDP78560 199 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 RNASELQ05823 741 aaKnown RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 ADIGQ0VDE8 80 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 OLIG2Q13516 323 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PNMA8AQ86V59 439 aaPredicted RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 CAND1Q86VP6 1230 aaKnown RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 RNF169Q8NCN4 708 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 TCP10LQ8TDR4 215 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 FAM149B1Q96BN6 582 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PARK7Q99497 189 aaKnown RBP12.25□□□□□ -0.45
RHO-201ENST00000296271 PAAF1Q9BRP4 392 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 RHOBTB2Q9BYZ6 727 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 NRDE2Q9H7Z3 1164 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 KLC4Q9NSK0 619 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 PRKAG3Q9UGI9 489 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 SLC12A4Q9UP95 1085 aa12.25□□□□□ -0.45
RHO-201ENST00000296271 LAMA3Q16787 3333 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 IQCA1LA6NCM1 817 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 A8MUI8 341 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 PTGESO14684 152 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 TOP3BO95985 862 aaKnown RBP12.24□□□□□ -0.45
RHO-201ENST00000296271 ACAP1Q15027 740 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 SYPL2Q5VXT5 272 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 WSCD1Q658N2 575 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 PIGZQ86VD9 579 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 TDRPQ86YL5 185 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 LGMNQ99538 433 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 NSRP1Q9H0G5 558 aaKnown RBP12.24□□□□□ -0.45
RHO-201ENST00000296271 ACSS3Q9H6R3 686 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 PHTF1Q9UMS5 762 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 TEX264Q9Y6I9 313 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 I3L4J1 428 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 ZBED1O96006 694 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 CACNA2D1P54289 1103 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 LILRA4P59901 499 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 BMPR2Q13873 1038 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 MORN1Q5T089 497 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 SLC9A4Q6AI14 798 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 TWF2Q6IBS0 349 aaKnown RBP12.24□□□□□ -0.45
RHO-201ENST00000296271 CYB5D1Q6P9G0 228 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 TRMT10BQ6PF06 316 aaKnown RBP12.24□□□□□ -0.45
RHO-201ENST00000296271 KCNT2Q6UVM3 1135 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 PAQR9Q6ZVX9 377 aa12.24□□□□□ -0.45
RHO-201ENST00000296271 PCGF5Q86SE9 256 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms