RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CHMP6Q96FZ7 201 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 MYRFLQ96LU7 910 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 GCNAQ96QF7 691 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 LRRC4Q9HBW1 653 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 TMEM59LQ9UK28 342 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 TMEM191CA6NGB0 347 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 CES2O00748 559 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 SAT1P21673 171 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 RRM1P23921 792 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PTPN9P43378 593 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 CLCN4P51793 760 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 ADCY1Q08828 1119 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 TUBB2AQ13885 445 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 PIGHQ14442 188 aaPredicted RBP8.82□□□□□ -1
PTPDC1-201ENST00000288976 BNIPLQ7Z465 357 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 ITIH5Q86UX2 942 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 B3GALT6Q96L58 329 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 TUBB2BQ9BVA1 445 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 COG5Q9UP83 839 aa8.82□□□□□ -1
PTPDC1-201ENST00000288976 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 PAPSS1O43252 624 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 OR1D2P34982 312 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 TUBP50607 506 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 DAOAP59103 153 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 MTA1Q13330 715 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 TIFAQ96CG3 184 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 ABI2Q9NYB9 513 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 SEPT10Q9P0V9 454 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 UXTQ9UBK9 157 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 TEX28O15482 410 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 CRCPO75575 148 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 BEST1O76090 585 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 CXCL14O95715 111 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 ZBED1O96006 694 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 HNRNPA1P09651 372 aaKnown RBP eCLIP8.81□□□□□ -1
PTPDC1-201ENST00000288976 TKTL1P51854 596 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 SLC5A3P53794 718 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 FAM109BQ6ICB4 259 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 SLC22A17Q8WUG5 538 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 PGAP3Q96FM1 320 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 HGSO14964 777 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 PROSCO94903 275 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 OR4Q2P0C623 313 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 KRT3P12035 628 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 DNAJB1P25685 340 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 ZNF143P52747 638 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 CACNA2D1P54289 1103 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 AIF1P55008 147 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 MLLT1Q03111 559 aaPredicted RBP8.81□□□□□ -1
PTPDC1-201ENST00000288976 ADIGQ0VDE8 80 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 LRRC38Q5VT99 294 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 DNAI1Q9UI46 699 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 YIPF1Q9Y548 306 aa8.81□□□□□ -1
PTPDC1-201ENST00000288976 GRID2IPA4D2P6 1211 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GRXCR1A8MXD5 290 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 MIF4GDA9UHW6 222 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 PSTPIP1O43586 416 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GABBR2O75899 941 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CSH1P0DML2 217 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CSH2P0DML3 217 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 MYOGP15173 224 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CYP2F1P24903 491 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ERVFC1P60507 584 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 MXRA7P84157 204 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ZBTB16Q05516 673 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 SF3A3Q12874 501 aaKnown RBP eCLIP8.8□□□□□ -1
PTPDC1-201ENST00000288976 BHLHA9Q7RTU4 235 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 LEMD2Q8NC56 503 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 IFT81Q8WYA0 676 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CCT6BQ92526 530 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CENPIQ92674 756 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 POPDC2Q9HBU9 364 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 OLA1Q9NTK5 396 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 CLIC5Q9NZA1 410 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 JRKLQ9Y4A0 524 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 INSL5Q9Y5Q6 135 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 C2CD4BA6NLJ0 364 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 SLC38A8A6NNN8 435 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GOLGA8SH3BPF8 625 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 POLR3GO15318 223 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 CLASP2O75122 1294 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 ENDOD1O94919 500 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ARHGEF15O94989 841 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GLUD1P00367 558 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ZDHHC11BP0C7U3 371 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 PRLRP16471 622 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 POU3F3P20264 500 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 GPD1P21695 349 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 ETF1P62495 437 aaKnown RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 NNTQ13423 1086 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CLUL1Q15846 466 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CCDC14Q49A88 953 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 CYP4A22Q5TCH4 519 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 OR6B2Q6IFH4 312 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 TMC7Q7Z402 723 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 TADA2BQ86TJ2 420 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.8□□□□□ -1
PTPDC1-201ENST00000288976 NT5C3BQ969T7 300 aa8.8□□□□□ -1
PTPDC1-201ENST00000288976 METTL5Q9NRN9 209 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms