RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 MYLIPQ8WY64 445 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 SLC2A13Q96QE2 648 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 GAS2L1Q99501 681 aaPredicted RBP22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 CORO1BQ9BR76 489 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 ANAPC7Q9UJX3 599 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 NUDT5Q9UKK9 219 aa22.84■■□□□ 1.25
PDLIM3-203ENST00000284771 PRUNE2Q8WUY3 3088 aa22.83■■□□□ 1.25
PDLIM3-203ENST00000284771 ZNF840PA6NDX5 716 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 TFE3P19532 575 aaPredicted RBP22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 LTBRP36941 435 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 NOP2P46087 812 aaKnown RBP22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 HADHBP55084 474 aaKnown RBP22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 PITX1P78337 314 aaPredicted RBP22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 ARHGAP29Q52LW3 1261 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 SNX30Q5VWJ9 437 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 TXLNBQ8N3L3 684 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 RXFP2Q8WXD0 754 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 GUCD1Q96NT3 240 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 TSGA10Q9BZW7 698 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 EHD2Q9NZN4 543 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 CDH22Q9UJ99 828 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 CAPN6Q9Y6Q1 641 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 OBSL1O75147 1896 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 C2orf16Q68DN1 1984 aa22.83■■□□□ 1.24
PDLIM3-203ENST00000284771 MOCS3O95396 460 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 PTPN2P17706 415 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 EPHA5P54756 1037 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 NTHL1P78549 312 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 COL19A1Q14993 1142 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 CCDC14Q49A88 953 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 SH3PXD2AQ5TCZ1 1133 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 ANKRD54Q6NXT1 300 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 CPNE8Q86YQ8 564 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 ELMOD1Q8N336 334 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 TPCN2Q8NHX9 752 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 CFAP57Q96MR6 1250 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 APOL5Q9BWW9 433 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 GOLPH3Q9H4A6 298 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 SFXN1Q9H9B4 322 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 TLR8Q9NR97 1041 aaKnown RBP22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 ABCC13Q9NSE7 274 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 CALCOCO1Q9P1Z2 691 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 DENND4CQ5VZ89 1909 aa22.82■■□□□ 1.24
PDLIM3-203ENST00000284771 SPDYE4A6NLX3 237 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 TBX10O75333 385 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 POU2F2P09086 479 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 NCAM1P13591 858 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 PDGFRAP16234 1089 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 GABRR2P28476 465 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 MATKP42679 507 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 RAB6CQ53S08 254 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 DCAF6Q58WW2 860 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 GRASPQ7Z6J2 395 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 MICALL1Q8N3F8 863 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 DEFB123Q8N688 67 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 CMASQ8NFW8 434 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 OVCA2Q8WZ82 227 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 NT5C3BQ969T7 300 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 DDX23Q9BUQ8 820 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 RAB6CQ9H0N0 254 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 UXTQ9UBK9 157 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 BUB1BO60566 1050 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 DAB1O75553 588 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 TBX18O95935 607 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 RHOP08100 348 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 GJA1P17302 382 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 SLC5A9Q2M3M2 681 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 OTUD1Q5VV17 481 aaPredicted RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 DAB2IPQ5VWQ8 1189 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 BTBD8Q5XKL5 378 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 ELMSAN1Q6PJG2 1045 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 ZSCAN30Q86W11 494 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 RNF10Q8N5U6 811 aaKnown RBP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 ARFGAP1Q8N6T3 406 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 FNIP1Q8TF40 1166 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 TCEAL4Q96EI5 215 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 CCSER2Q9H7U1 834 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 ASAH2Q9NR71 780 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 DZANK1Q9NVP4 752 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 CLIC5Q9NZA1 410 aa22.81■■□□□ 1.24
PDLIM3-203ENST00000284771 MYO1FO00160 1098 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 XYLBO75191 536 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 MOSPD3O75425 235 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 NOS2P35228 1153 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 ZNF143P52747 638 aaPredicted RBP22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 NAP1L1P55209 391 aaKnown RBP22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 C15orf59Q2T9L4 293 aaPredicted RBP22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 RARS2Q5T160 578 aaKnown RBP22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 BEND5Q7L4P6 421 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 SMG7Q92540 1137 aaKnown RBP22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 CLDND1Q9NY35 253 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 TRPM5Q9NZQ8 1165 aa22.8■■□□□ 1.24
PDLIM3-203ENST00000284771 A0A1W2PRU2 124 aa22.79■■□□□ 1.24
PDLIM3-203ENST00000284771 GRID2IPA4D2P6 1211 aa22.79■■□□□ 1.24
PDLIM3-203ENST00000284771 C2orf78A6NCI8 922 aa22.79■■□□□ 1.24
PDLIM3-203ENST00000284771 CAPN9O14815 690 aa22.79■■□□□ 1.24
PDLIM3-203ENST00000284771 MYL4P12829 197 aa22.79■■□□□ 1.24
PDLIM3-203ENST00000284771 RARGP13631 454 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms