RNA–Protein interactions for RNA: ENST00000277817.10

HERC4-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,371 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-201ENST00000277817 LRRC45Q96CN5 670 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 DHTKD1Q96HY7 919 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 RPGRIP1Q96KN7 1286 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 IQCGQ9H095 443 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 STMN4Q9H169 189 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 PPANQ9NQ55 473 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 RWDD2AQ9UIY3 292 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.06□□□□□ -1.92
HERC4-201ENST00000277817 CCL27Q9Y4X3 112 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 MRFAP1Q9Y605 127 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 XDHP47989 1333 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 UBN2Q6ZU65 1347 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 TRIM49BA6NDI0 452 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PPIP5K2O43314 1243 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NDUFA10O95299 355 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 F11P03951 625 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SERPINB2P05120 415 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SRGAP2BP0DMP2 458 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 KCNA2P16389 499 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NR2F2P24468 414 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 HOXC8P31273 242 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PHKA2P46019 1235 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 SNAP25P60880 206 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ZBTB16Q05516 673 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ADIPOQQ15848 244 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 UAP1Q16222 522 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 UBE2SQ16763 222 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 KRT71Q3SY84 523 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 TCP11X2Q5H9J9 407 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CEP85LQ5SZL2 805 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 DCLRE1AQ6PJP8 1040 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 GBP6Q6ZN66 633 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 B4GALNT4Q76KP1 1039 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NUP54Q7Z3B4 507 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 UHMK1Q8TAS1 419 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 SH3RF3Q8TEJ3 882 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 RIN2Q8WYP3 895 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 DPF2Q92785 391 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CCDC127Q96BQ5 260 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 KAZALD1Q96I82 304 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 CABS1Q96KC9 395 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 IFT74Q96LB3 600 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ITPAQ9BY32 194 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 DNAI2Q9GZS0 605 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NSRP1Q9H0G5 558 aaKnown RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 DPH5Q9H2P9 285 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 KCNF1Q9H3M0 494 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 MUC13Q9H3R2 512 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 NHEJ1Q9H9Q4 299 aaPredicted RBP3.06□□□□□ -1.92
HERC4-201ENST00000277817 SENP2Q9HC62 589 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 VPS45Q9NRW7 570 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 ASIC3Q9UHC3 531 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 AMFRQ9UKV5 643 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 GINS2Q9Y248 185 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 HYOU1Q9Y4L1 999 aa3.06□□□□□ -1.92
HERC4-201ENST00000277817 PP2D1A8MPX8 630 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 E7EVH7 732 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 J3QL48 77 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 LAD1O00515 517 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 HNRNPDLO14979 420 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 CLIC2O15247 247 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 GDF9O60383 454 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 SRGAP2O75044 1071 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 TBX10O75333 385 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 PPM1BO75688 479 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 GDF11O95390 407 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 TTLL1O95922 423 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 FDPSP14324 419 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 TCP1P17987 556 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 TNNI1P19237 187 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 CTNNA1P35221 906 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 YARSP54577 528 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 SNX16P57768 344 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 GNGT1P63211 74 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 FKBP3Q00688 224 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 DMTNQ08495 405 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 IQCB1Q15051 598 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 TBCCQ15814 346 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 EXOC3L4Q17RC7 722 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 SETMARQ53H47 684 aaPredicted RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 MBNL2Q5VZF2 373 aaKnown RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 ARMCX5Q6P1M9 558 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 USP49Q70CQ1 688 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 ZNF365Q70YC5 407 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 VSIG1Q86XK7 387 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 SYTL1Q8IYJ3 562 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 SYCE1Q8N0S2 351 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 CCDC63Q8NA47 563 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 GLIS1Q8NBF1 620 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 BCAS4Q8TDM0 211 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 CHURC1Q8WUH1 139 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 RADILQ96JH8 1075 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 AK8Q96MA6 479 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 KREMEN1Q96MU8 473 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 MOGAT1Q96PD6 335 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 PANX2Q96RD6 677 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 KRT12Q99456 494 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 PHF7Q9BWX1 381 aaPredicted RBP3.05□□□□□ -1.92
HERC4-201ENST00000277817 SLC12A9Q9BXP2 914 aa3.05□□□□□ -1.92
HERC4-201ENST00000277817 IRX2Q9BZI1 471 aaPredicted RBP3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms