RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZWILCHQ9H900 591 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 CYP3A43Q9HB55 503 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TMEM39AQ9NV64 488 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ASNSD1Q9NWL6 643 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TBX21Q9UL17 535 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF286BP0CG31 522 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 CD19P15391 556 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 SSTR1P30872 391 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 CPT1AP50416 773 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 GDF10P55107 478 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 EIF3EP60228 445 aaKnown RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TFDP2Q14188 446 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 HSDL1Q3SXM5 330 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 FAM47CQ5HY64 1035 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 HP1BP3Q5SSJ5 553 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ANKRD22Q5VYY1 191 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 SCARA3Q6AZY7 606 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ANKMY2Q8IV38 441 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TTC39CQ8N584 583 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 JOSD2Q8TAC2 188 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 DCAKDQ8WVC6 231 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 SPOCK2Q92563 424 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 UTP4Q969X6 686 aaKnown RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 ACSF2Q96CM8 615 aaPredicted RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 NFKBIZQ9BYH8 718 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TRMT13Q9NUP7 481 aaKnown RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 PRKAG2Q9UGJ0 569 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 XPO7Q9UIA9 1087 aaKnown RBP13.45□□□□□ -0.26
C9orf3-201ENST00000277198 TNFSF13BQ9Y275 285 aa13.45□□□□□ -0.26
C9orf3-201ENST00000277198 GOLGA8SH3BPF8 625 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 CHADO15335 359 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 CD4P01730 458 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 DHRS4L1P0CG22 281 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 T-ENOLP0DO92 83 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 P4HA1P13674 534 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 PTPN4P29074 926 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 CLNS1AP54105 237 aaKnown RBP13.44□□□□□ -0.26
C9orf3-201ENST00000277198 RAD23BP54727 409 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 DPYSL3Q14195 570 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 MSS51Q4VC12 460 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 C9orf50Q5SZB4 431 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 ATF7IP2Q5U623 682 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 NLRP9Q7RTR0 991 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 TCP10LQ8TDR4 215 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 SLC7A6OSQ96CW6 309 aaPredicted RBP13.44□□□□□ -0.26
C9orf3-201ENST00000277198 PPP1R12CQ9BZL4 782 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 SYNCQ9H7C4 482 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 MANSC1Q9H8J5 431 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 RNPEPL1Q9HAU8 725 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 PNPLA8Q9NP80 782 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 USP18Q9UMW8 372 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 TRIM33Q9UPN9 1127 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 CDH23Q9H251 3354 aa13.44□□□□□ -0.26
C9orf3-201ENST00000277198 GOLGA8MH3BSY2 632 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 KIAA0355O15063 1070 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 DNAJC6O75061 913 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TRUB2O95900 331 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 LMNAP02545 664 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 MT-ND3P03897 115 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SRGAP2CP0DJJ0 459 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 RBP3P10745 1247 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CALB2P22676 271 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 MIPP30301 263 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 ZNF143P52747 638 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 DYNLT1P63172 113 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SLC18A2Q05940 514 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 PTPN11Q06124 597 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 POU5F1BQ06416 359 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 NBPF20Q3BBV1 942 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 KCNT1Q5JUK3 1230 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CAPN12Q6ZSI9 719 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 RFX6Q8HWS3 928 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SLC44A1Q8WWI5 657 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 MIEF2Q96C03 454 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 LRCH3Q96II8 777 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TOX2Q96NM4 488 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CPXM1Q96SM3 734 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 LBHD1Q9BQE6 289 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 WDR83Q9BRX9 315 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 MTG1Q9BT17 334 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TRIM55Q9BYV6 548 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 RPF1Q9H9Y2 349 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CYTH4Q9UIA0 394 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 ZFP69BQ9UJL9 534 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 KIAA1257Q9ULG3 409 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 IKBKGQ9Y6K9 419 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 SCN10AQ9Y5Y9 1956 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CFAP69A5D8W1 941 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 KLF11O14901 512 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 LIN7AO14910 233 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CILPO75339 1184 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CABYRO75952 493 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TMEM63AO94886 807 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 LUC7L3O95232 432 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 VDRP11473 427 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 CYP2C9P11712 490 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 ADRA1DP25100 572 aa13.43□□□□□ -0.26
C9orf3-201ENST00000277198 TARSP26639 723 aaKnown RBP13.43□□□□□ -0.26
C9orf3-201ENST00000277198 BMP8BP34820 402 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms