RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 KRT18P05783 430 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 MYCLP1P12525 358 aaPredicted RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 CD247P20963 164 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 ZNF76P36508 570 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 RPS3AP61247 264 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 ZCCHC9Q8N567 271 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 HELQQ8TDG4 1101 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 NAP1L4Q99733 375 aaKnown RBP16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 RABL2BQ9UNT1 228 aa16.31■□□□□ 0.2
CTDSP1-201ENST00000273062 WNT10BO00744 389 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 ZBTB39O15060 712 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 C21orf59P57076 290 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 NSUN2Q08J23 767 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 CBWD6Q4V339 395 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 CBWD3Q5JTY5 395 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 CBWD5Q5RIA9 395 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 DENND5BQ6ZUT9 1274 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 NOP9Q86U38 636 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 NIM1KQ8IY84 436 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 TSPAN14Q8NG11 270 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 KLC2Q9H0B6 622 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 EHD1Q9H4M9 534 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 OLFML3Q9NRN5 406 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 ZNRF3Q9ULT6 936 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 IGLV3-22A0A075B6J6 115 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 ZBTB7AO95365 584 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 PROCP04070 461 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 TUFMP49411 452 aaKnown RBP16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 CDH15P55291 814 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 GPC5P78333 572 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 ARL13BQ3SXY8 428 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 NIPAL1Q6NVV3 410 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 SAMD3Q8N6K7 520 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 TRIML2Q8N7C3 387 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 MZB1Q8WU39 189 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 PCDHB18PQ96TA0 734 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 AGPAT1Q99943 283 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 BHMT2Q9H2M3 363 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 ANLNQ9NQW6 1124 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 CDH22Q9UJ99 828 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 POU2F3Q9UKI9 436 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 CORINQ9Y5Q5 1042 aa16.3■□□□□ 0.2
CTDSP1-201ENST00000273062 PIK3CDO00329 1044 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A9O60656 530 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ETS1P14921 441 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ZNF12P17014 697 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ZNF23P17027 643 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A6P19224 532 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A1P22309 533 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A4P22310 534 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A3P35503 534 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A5P35504 534 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ETV4P43268 484 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 AQP5P55064 265 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 KCNC4Q03721 635 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 MOXD1Q6UVY6 613 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 SIX5Q8N196 739 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ZNF564Q8TBZ8 553 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 REEP2Q9BRK0 252 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A7Q9HAW7 530 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A10Q9HAW8 530 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 UGT1A8Q9HAW9 530 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 CDC14AQ9UNH5 594 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 SRCAPQ6ZRS2 3230 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 CCDC195A0A1B0GUA6 201 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ANKRD34BA5PLL1 514 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 GOLGA8SH3BPF8 625 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 GOLGA8MH3BSY2 632 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 HSPA8P11142 646 aaKnown RBP16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ADSSP30520 456 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 GSSP48637 474 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 GPX6P59796 221 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ANKS1BQ7Z6G8 1248 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 KBTBD6Q86V97 674 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 PEX5LQ8IYB4 626 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 PQLC1Q8N2U9 271 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 CHPT1Q8WUD6 406 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 RUSC1Q9BVN2 902 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 VTA1Q9NP79 307 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 GPRC5DQ9NZD1 345 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 SSX2IPQ9Y2D8 614 aa16.29■□□□□ 0.2
CTDSP1-201ENST00000273062 ASTN2O75129 1339 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 ATE1O95260 518 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 SSTR1P30872 391 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 CAP2P40123 477 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 ALDH3B2P48448 385 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 NUP107P57740 925 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 GAD2Q05329 585 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 LRP8Q14114 963 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 TFDP1Q14186 410 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 CCNG2Q16589 344 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 Q8N9G6 341 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 BORCS5Q969J3 196 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 ISOC1Q96CN7 298 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 ACAP3Q96P50 834 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 GIN1Q9NXP7 522 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 PGAP2Q9UHJ9 254 aa16.28■□□□□ 0.2
CTDSP1-201ENST00000273062 RAB26Q9ULW5 256 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms