RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 CUEDC2Q9H467 287 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 KIAA1586Q9HCI6 787 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 CD93Q9NPY3 652 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 FSCN3Q9NQT6 498 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 OSER1Q9NX31 292 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 GMIPQ9P107 970 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 NXF1Q9UBU9 619 aaKnown RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 CHORDC1Q9UHD1 332 aaPredicted RBP9.51□□□□□ -0.89
TPM3-201ENST00000271850 ANGPTL2Q9UKU9 493 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 PCDHA7Q9UN72 937 aa9.51□□□□□ -0.89
TPM3-201ENST00000271850 PCDH15Q96QU1 1955 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 DMXL2Q8TDJ6 3036 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 HHLA1C9JL84 531 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 MBL2P11226 248 aaPredicted RBP9.5□□□□□ -0.89
TPM3-201ENST00000271850 ADH5P11766 374 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 CCDC130P13994 396 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 SPINK2P20155 84 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 ANXA13P27216 316 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 YWHAQP27348 245 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 GBP1P32455 592 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 EIF2DP41214 584 aaKnown RBP9.5□□□□□ -0.89
TPM3-201ENST00000271850 TNNC1P63316 161 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 IRX4P78413 519 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 MRPS21P82921 87 aaKnown RBP9.5□□□□□ -0.89
TPM3-201ENST00000271850 FOXC1Q12948 553 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 KNOP1Q1ED39 458 aaKnown RBP9.5□□□□□ -0.89
TPM3-201ENST00000271850 RESP18Q5W5W9 173 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 SPOPLQ6IQ16 392 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 TMEM25Q86YD3 366 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 NUP93Q8N1F7 819 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 DDX1Q92499 740 aaKnown RBP9.5□□□□□ -0.89
TPM3-201ENST00000271850 FBXO32Q969P5 355 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 PNKPQ96T60 521 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 KCTD10Q9H3F6 313 aa9.5□□□□□ -0.89
TPM3-201ENST00000271850 ATXN2Q99700 1313 aaKnown RBP9.5□□□□□ -0.89
TPM3-201ENST00000271850 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 A0A1W2PQF6 199 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 E2F8A0AVK6 867 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 C1QTNF9BB2RNN3 333 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 HOXC11O43248 304 aaPredicted RBP9.49□□□□□ -0.89
TPM3-201ENST00000271850 TULP3O75386 442 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 RHOBTB1O94844 696 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 TBX18O95935 607 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ABL1P00519 1130 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 C1QTNF9P0C862 333 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ATICP31939 592 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 AFMP43652 599 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ASPAP45381 313 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 PPP3CCP48454 512 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 PDE6CP51160 858 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 NOVA1P51513 510 aaKnown RBP9.49□□□□□ -0.89
TPM3-201ENST00000271850 NR1H3Q13133 447 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ELF2Q15723 593 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 SH3PXD2AQ5TCZ1 1133 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 PEAR1Q5VY43 1037 aaPredicted RBP9.49□□□□□ -0.89
TPM3-201ENST00000271850 STXBP4Q6ZWJ1 553 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ARMCX6Q7L4S7 300 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ACOT1Q86TX2 421 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 TMEFF1Q8IYR6 380 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 NAT16Q8N8M0 369 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 C12orf29Q8N999 325 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 IQUBQ8NA54 791 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 TMEM174Q8WUU8 243 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 OVCA2Q8WZ82 227 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ACOX2Q99424 681 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
TPM3-201ENST00000271850 NMUR1Q9HB89 426 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 APOBEC3GQ9HC16 384 aaKnown RBP9.49□□□□□ -0.89
TPM3-201ENST00000271850 CSNK1G1Q9HCP0 422 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 ARHGEF4Q9NR80 690 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 KRT82Q9NSB4 513 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 SERTAD1Q9UHV2 236 aa9.49□□□□□ -0.89
TPM3-201ENST00000271850 PKD1L2Q7Z442 2459 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 PVALEFA0A1B0GWK0 134 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 TCRBV21S2A2A0A5A6 115 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 MDM4O15151 490 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 EXOC3O60645 756 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 AP1G2O75843 785 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 F13A1P00488 732 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 GABRG2P18507 467 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 GRIA2P42262 883 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 PI4KAP42356 2102 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 TUBP50607 506 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 NDST1P52848 882 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 SNRPFP62306 86 aaKnown RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 INSM1Q01101 510 aaPredicted RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 NCOA4Q13772 614 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 ZNF699Q32M78 642 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 ZACNQ401N2 412 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 USP39Q53GS9 565 aaKnown RBP9.48□□□□□ -0.89
TPM3-201ENST00000271850 HECTD3Q5T447 861 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 EGFLAMQ63HQ2 1017 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 KIAA1211LQ6NV74 962 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 TOGARAM2Q6ZUX3 1019 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 CYP2U1Q7Z449 544 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 SLC9A9Q8IVB4 645 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 SLC2A14Q8TDB8 520 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 WHAMMQ8TF30 809 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 HMGB4Q8WW32 186 aa9.48□□□□□ -0.89
TPM3-201ENST00000271850 PIGKQ92643 395 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms