RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 CLIC5Q9NZA1 410 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SLC17A7Q9P2U7 560 aa16.6■□□□□ 0.25
MAP1LC3B-201ENST00000268607 OR6B1O95007 311 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CCDC166P0CW27 439 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 INSRRP14616 1297 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ACO1P21399 889 aaKnown RBP16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 NSFP46459 744 aaKnown RBP16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 LAMTOR4Q0VGL1 99 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MAP7Q14244 749 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 THNSL1Q8IYQ7 743 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SKA1Q96BD8 255 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MTMR12Q9C0I1 747 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MIS12Q9H081 205 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MANSC1Q9H8J5 431 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RMI1Q9H9A7 625 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 KCNK13Q9HB14 408 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GNA15P30679 374 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TNFAIP2Q03169 654 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 DEFB115Q30KQ5 88 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.59■□□□□ 0.251e-7■□□□□ 9.4
MAP1LC3B-201ENST00000268607 ZNF784Q8NCA9 323 aaPredicted RBP16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 OR6J1Q8NGC5 347 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CYTH2Q99418 400 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 PSMC3IPQ9P2W1 217 aaPredicted RBP16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 GJD2Q9UKL4 321 aa16.59■□□□□ 0.25
MAP1LC3B-201ENST00000268607 MSCO60682 206 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ZNF189O75820 626 aaPredicted RBP16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 HNRNPCP07910 306 aaKnown RBP eCLIP16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 RARBP10826 455 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ELNP15502 786 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 CDK16Q00536 496 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 DSG1Q02413 1049 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SH2D4BQ5SQS7 431 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ENOSF1Q7L5Y1 443 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ANKMY2Q8IV38 441 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 FBXO27Q8NI29 283 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SNRNP27Q8WVK2 155 aaKnown RBP16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TTC1Q99614 292 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 OSBPL8Q9BZF1 889 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ABHD16BQ9H3Z7 469 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 ANGPTL2Q9UKU9 493 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 USTQ9Y2C2 406 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 TBC1D30Q9Y2I9 924 aa16.58■□□□□ 0.25
MAP1LC3B-201ENST00000268607 SLC15A5A6NIM6 579 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 B4GALT5O43286 388 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 OPHN1O60890 802 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ZC3H11AO75152 810 aaKnown RBP eCLIP16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 BAG2O95816 211 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 VTNP04004 478 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PABPC4LP0CB38 370 aaKnown RBP16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ANPEPP15144 967 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TMEM132AQ24JP5 1023 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 DUS1LQ6P1R4 473 aaKnown RBP16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SCARA5Q6ZMJ2 495 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SATL1Q86VE3 508 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 OLFM3Q96PB7 478 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CGRRF1Q99675 332 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ECSITQ9BQ95 431 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TSSK1BQ9BXA7 367 aa16.58■□□□□ 0.24
MAP1LC3B-201ENST00000268607 A0A0J9YVX5 310 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 A8MXQ7 604 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 INO80B-WBP1J3KQ70 363 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 DNALI1O14645 258 aaPredicted RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 USP1O94782 785 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 LDHAP00338 332 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FUT4P22083 530 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GRIA2P42262 883 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 MYL6P60660 151 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TFAMQ00059 246 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PDIA2Q13087 525 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 EFCAB12Q6NXP0 572 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ST13P4Q8IZP2 240 aaPredicted RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ABRAQ8N0Z2 381 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CLPTM1LQ96KA5 538 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 INO80BQ9C086 356 aaPredicted RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 B2RBV5 119 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GOLGA8SH3BPF8 625 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 H3BRB1 525 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 H3BRJ5 948 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GOLGA8MH3BSY2 632 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PIGRP01833 764 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PRKCBP05771 671 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 WEE2P0C1S8 567 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 FLT3LGP49771 235 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 PRKCZQ05513 592 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 KAZNQ674X7 775 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 C16orf70Q9BSU1 422 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TUT1Q9H6E5 874 aaKnown RBP16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 VTA1Q9NP79 307 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ARHGEF4Q9NR80 690 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SETD4Q9NVD3 440 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 KLHL11Q9NVR0 708 aa16.57■□□□□ 0.24
MAP1LC3B-201ENST00000268607 DNAJC6O75061 913 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SLC1A1P43005 524 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ARSEP51690 589 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 TAS2R40P59535 323 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 SREBF2Q12772 1141 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 GPS1Q13098 491 aa16.56■□□□□ 0.24
MAP1LC3B-201ENST00000268607 CBX3Q13185 183 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms