RNA–Protein interactions for RNA: ENST00000265354.5

SRF-201, Transcript of serum response factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRF, Length 4,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRF-201ENST00000265354 SCUBE3Q8IX30 993 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 CATSPER2Q96P56 530 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
SRF-201ENST00000265354 TMX2Q9Y320 296 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 TPH1P17752 444 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 MYBPC2Q14324 1141 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 DENND1BQ6P3S1 775 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 FOXR2Q6PJQ5 311 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 HPS6Q86YV9 775 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 FAM172AQ8WUF8 416 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 MKL1Q969V6 931 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 LENG9Q96B70 501 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 ANKRD27Q96NW4 1050 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 PHACTR1Q9C0D0 580 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 ACSS3Q9H6R3 686 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 PTPRHQ9HD43 1115 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 AAASQ9NRG9 546 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 MYH7BA7E2Y1 1941 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 CASZ1Q86V15 1759 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 LINGO3P0C6S8 592 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 FDX1P10109 184 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 RALGPS1Q5JS13 557 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 ACOT1Q86TX2 421 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 C4orf19Q8IY42 314 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 OR6Y1Q8NGX8 325 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 PLEKHO2Q8TD55 490 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 CASP10Q92851 521 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 AS3MTQ9HBK9 375 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 SSX2IPQ9Y2D8 614 aa17.68■□□□□ 0.42
SRF-201ENST00000265354 FKBP6O75344 327 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 HMGCRP04035 888 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 PHKA2P46019 1235 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 GTF2BQ00403 316 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 HERPUD2Q9BSE4 406 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 NR2E3Q9Y5X4 410 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 GAKO14976 1311 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 CNTNAP4Q9C0A0 1308 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 ICAM1P05362 532 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 KDELR1P24390 212 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 TNFSF9P41273 254 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 MGAT5Q09328 741 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 SURF1Q15526 300 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 TAF5Q15542 800 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 DCAF6Q58WW2 860 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 SLC9A9Q8IVB4 645 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 MAP4K3Q8IVH8 894 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 CPA3P15088 417 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 PSMD7P51665 324 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 C16orf72Q14CZ0 275 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 SNX32Q86XE0 403 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 EPB41L4BQ9H329 900 aa17.67■□□□□ 0.42
SRF-201ENST00000265354 KLHL33A6NCF5 533 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 GARTP22102 1010 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 HDAC4P56524 1084 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 PPIDQ08752 370 aaKnown RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 PRR11Q96HE9 360 aaPredicted RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 PHF12Q96QT6 1004 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 PIF1Q9H611 641 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 PNPOQ9NVS9 261 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 hCG_1818297A0A087WSY0 165 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 SPAG6O75602 509 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 KRT75O95678 551 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 MARK2Q7KZI7 788 aaKnown RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 C10orf82Q8WW14 230 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 CST3P01034 146 aaPredicted RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 F7P08709 466 aaPredicted RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 CXCL8P10145 99 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 ERVK-10P10266 1014 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 PDK3Q15120 406 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 EMC10Q5UCC4 262 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 RBM44Q6ZP01 1051 aaKnown RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 CCDC80Q76M96 950 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 DDIASQ8IXT1 998 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 PCDH20Q8N6Y1 951 aaKnown RBP17.66■□□□□ 0.42
SRF-201ENST00000265354 CPT1BQ92523 772 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 EBF4Q9BQW3 602 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 ADNPQ9H2P0 1102 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 KRT82Q9NSB4 513 aa17.66■□□□□ 0.42
SRF-201ENST00000265354 HSPA8P11142 646 aaKnown RBP17.65■□□□□ 0.42
SRF-201ENST00000265354 ABL2P42684 1182 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 CLCN3P51790 818 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 SPDYAQ5MJ70 313 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 PIWIL2Q8TC59 973 aaKnown RBP17.65■□□□□ 0.42
SRF-201ENST00000265354 TRAPPC12Q8WVT3 735 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 BSNDQ8WZ55 320 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 PTPRN2Q92932 1015 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 SERAC1Q96JX3 654 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 HAUS8Q9BT25 410 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 THAP1Q9NVV9 213 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 TCRBV7S3A2A0A539 114 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 ENTPD3O75355 529 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 ADSSP30520 456 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 SERPINB9P50453 376 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 SLC5A9Q2M3M2 681 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 FAM47CQ5HY64 1035 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 TUBGCP5Q96RT8 1024 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 DMAC2Q9NW81 257 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 STX18Q9P2W9 335 aaKnown RBP17.65■□□□□ 0.42
SRF-201ENST00000265354 CDY2AQ9Y6F7 541 aa17.65■□□□□ 0.42
SRF-201ENST00000265354 CDY1Q9Y6F8 540 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms